Heterobasidion irregulare: HETIRDRAFT_308704
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Entry
HETIRDRAFT_308704 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K28527
splicing factor YJU2
Organism
hir
Heterobasidion irregulare
Pathway
hir03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HETIRDRAFT_308704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hir03041
]
HETIRDRAFT_308704
Spliceosome [BR:
hir03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
HETIRDRAFT_308704
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Saf4_Yju2
CDV3
Nop14
Motif
Other DBs
NCBI-GeneID:
20669608
NCBI-ProteinID:
XP_009542418
JGI:
Hetan2_308704
UniProt:
W4KKH5
LinkDB
All DBs
Position
Unknown
AA seq
246 aa
AA seq
DB search
VLNKYFPPDFDPALIPRRKQPKNAQQVVRLMAPFSMRCNTCGEYIYKGKKFNARKETVEG
EDYYGIKIFRFYIKCTLCSAEITFKTDPKNTDYSAEHGASRNFEPWREEKAVEEEDRLAK
LEEEENNPMKVLENRTTDSKREMDILDALQDIRARNARNERVGHSTDLLEKIGVQEDWDE
EDEQKKREQEEDEALVRQVFSKVAVPTAGPSRSPENAPSDPDKKKANAPKSLGIKLVKKP
KVKAIS
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
gtcctcaacaagtacttcccgcccgacttcgatcctgctcttataccccgccgcaaacaa
cccaagaatgcacaacaagttgtccgtctcatggcacccttctcaatgcgttgcaacacg
tgcggagagtatatctacaagggcaaaaagttcaacgcgagaaaggagaccgtcgaagga
gaggattattatggtatcaagatattccggttctacattaaatgcactctctgttctgct
gagatcacgttcaagacagatcctaagaacacagactactccgctgagcatggcgcctct
cgtaatttcgaaccttggagagaagagaaggctgtcgaagaggaggaccgactggcgaag
ctagaggaggaagagaacaacccgatgaaggtgttagagaacaggacgacggactcaaag
cgggagatggacattcttgatgcgctgcaggacatccgcgctcgaaacgctcgaaacgag
cgcgtaggacactcgacggatttattggagaagattggggtgcaagaagattgggatgaa
gaggacgaacagaagaagcgggagcaagaggaggacgaagcgctggtcaggcaagttttc
tcgaaagtcgctgtccccactgctggcccctctcgctctcccgaaaatgcaccctccgac
ccagataagaagaaagcgaacgctcccaaatcgttgggaataaagctggtcaagaaaccc
aaggtgaaagcgatctcatga
DBGET
integrated database retrieval system