Heterobasidion irregulare: HETIRDRAFT_309703
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Entry
HETIRDRAFT_309703 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
hir
Heterobasidion irregulare
Pathway
hir03030
DNA replication
hir03420
Nucleotide excision repair
hir03430
Mismatch repair
hir03440
Homologous recombination
hir03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HETIRDRAFT_309703
03420 Nucleotide excision repair
HETIRDRAFT_309703
03430 Mismatch repair
HETIRDRAFT_309703
03440 Homologous recombination
HETIRDRAFT_309703
03460 Fanconi anemia pathway
HETIRDRAFT_309703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hir03000
]
HETIRDRAFT_309703
03032 DNA replication proteins [BR:
hir03032
]
HETIRDRAFT_309703
03400 DNA repair and recombination proteins [BR:
hir03400
]
HETIRDRAFT_309703
Transcription factors [BR:
hir03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
HETIRDRAFT_309703
DNA replication proteins [BR:
hir03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
HETIRDRAFT_309703
DNA repair and recombination proteins [BR:
hir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
HETIRDRAFT_309703
MMR (mismatch excision repair)
HETIRDRAFT_309703
DSBR (double strand breaks repair)
HR (homologous recombination)
HETIRDRAFT_309703
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
RADX
DUF223
HROB
CDC24_OB3
Motif
Other DBs
NCBI-GeneID:
20669702
NCBI-ProteinID:
XP_009542949
JGI:
Hetan2_309703
UniProt:
W4KLF0
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MSSSTPQLTSGICERLQVGDRDDQELWDSSPIVQFLSIKKVSAGIATGSSSSTDRFRIIV
SDGVHFVQAMLATQLNHLVEEAVISKNTVAKLEKITCNVIQEKRLVVILALSVVHKEAPK
IGTPTAFGPDKVPGSSIPAKDTPTSSSTAVSTLVPAPAPAPAPASARSGGAPSASTQRGG
RNSTIFPIEGLSPYQNNWKIRARVTHKSDIRTYSNQRGEGKFFNVTFMDDTGEIKGTGFN
AVVDELYEKLQEDKVYFISKARVNLSKKKFSSVSNEYELSLERTTEIEECLDTANLPVVK
YNFVELSGLQDLTKDSLCDVIGIVKDIGDLGEINTKANRTIQKRELTLVDRSAFSVRLTL
WGKQAEQFNASPSTVIAFKGVKVGEFGGRSLSMFSSSTMAVSPDISEAHLLRGWYDDGGA
STSFTAHSSAGAGSGASINRNEMRTISEVKDAQLGMNEEKPDYFSTRATIMHIKSDNISY
PACHTEGCSKKVVESHDGWRCEKCDRSYPKPQYRYIMSMAVADHTGQVWLQGFNDVGVAV
FGKTADEVHEIKENDEAAYNDLMLKATCHTYMFGCRAKQDTFNDQTRVRYGITRIQPVDF
AAEARIYIDLLRSPWAQ
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgagctcttcaacccctcaacttacaagtggcatctgcgaacgtctccaagtaggagac
cgcgatgaccaggaactatgggatagctctcccatcgtccaattcctttcgattaaaaag
gtctcggcaggtatcgcgactgggagctcctcatctacggataggttcagaatcattgta
tccgatggcgtgcattttgtccaggccatgttggccactcagctcaatcatcttgtggaa
gaagccgtgatcagcaagaataccgtggccaagcttgagaagattacttgtaacgtcatc
caggagaagcgcttggttgttatacttgcactgagcgtcgtacacaaggaggcgccaaag
atcgggacccctactgcatttgggccagacaaagtcccgggttcaagtatcccagccaaa
gacacgcctacctctagttccactgcggtctccacgctagtcccagccccagctccagcc
ccagccccagcctcagcccgctcaggtggtgcgccctcagcttcgactcagagaggcggc
cggaatagtacaatctttcctattgaaggtcttagtccctatcagaacaattggaagatc
agggcaagagtcacacataaatctgacatccgaacgtactcgaatcaacgtggcgaaggc
aagttcttcaacgtcactttcatggacgatactggggagatcaaaggaactggatttaac
gccgtggtggatgagctgtacgagaagcttcaagaggacaaggtctacttcatctccaag
gctcgcgtcaatttatcgaagaagaaattttcttcggtgtccaatgagtatgaattgagc
ttggaacgtaccactgaaatcgaagaatgtctcgatacggcaaatctaccggtcgtcaag
tacaactttgttgaactttctggtctccaggatctaacgaaggatagtttatgcgacgtt
attggtatcgtcaaagacatcggtgacttgggagaaatcaacaccaaagcaaaccggacc
attcaaaaacgggagctaacacttgtcgatcgatcagcattttctgtccgtctcactcta
tggggcaaacaagcggaacaattcaatgcaagtccgtccaccgtcatcgcgttcaagggt
gtcaaagtcggtgaatttggaggacgctcgctttcgatgttcagctcaagcaccatggct
gtcagtccagacatttcagaggcccatctacttcgtggatggtacgacgatggtggcgca
agtacatccttcacggcgcactcttcggcaggtgctgggtcaggcgcttccatcaaccgc
aacgaaatgcgcacgatcagcgaggtgaaggatgcgcagctaggcatgaacgaggagaag
cccgattacttctctactcgtgcaacgattatgcatatcaagtcggacaacatatcttat
cctgcctgtcacaccgaaggatgcagcaagaaggttgtcgaaagccacgacggttggagg
tgcgagaaatgtgatcgcagttatccgaaaccccagtatcggtatatcatgtccatggct
gtcgccgaccatactggacaggtttggttgcagggtttcaatgatgtcggtgtggctgtt
ttcggtaagaccgcagacgaggtccacgaaatcaaggagaatgacgaagcggcctacaac
gacctgatgctgaaggcgacttgccacacatacatgtttgggtgtcgggcgaaacaggat
acgttcaacgatcaaactcgtgtccgctatggcataacgcgcattcagcctgttgacttt
gctgcagaggcccgcatctatatcgaccttcttcggtcgccttgggcccagtga
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integrated database retrieval system
