Heterobasidion irregulare: HETIRDRAFT_309780
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Entry
HETIRDRAFT_309780 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_309780
03036 Chromosome and associated proteins [BR:
hir03036
]
HETIRDRAFT_309780
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
HETIRDRAFT_309780
Chromosome and associated proteins [BR:
hir03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
HETIRDRAFT_309780
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
HETIRDRAFT_309780
microRNA pathway
RISC loading complex
HETIRDRAFT_309780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoL2
ArgoN
ArgoMid
ArgoL1
Motif
Other DBs
NCBI-GeneID:
20669712
NCBI-ProteinID:
XP_009542553
JGI:
Hetan2_309780
UniProt:
W4KIP0
LinkDB
All DBs
Position
Unknown
AA seq
745 aa
AA seq
DB search
RRAREIVDKMQIAYASVFQPRAAFDGKKNLYSSKEIAPGGSISVGSPTCMPADFASALNL
VQMLIMQAPMLHSKTYNARAVFSSIGARPLGGGLEIWPGFFHYAPGPLISFVLDFLKMTV
QDLANLDPLSSRWKLLRATLHKVRITVDVPVGRRSRPIKDLVPRGGLYTFKKGDRTLTVK
DHYLEEHNKTLSYPRIFGVRMPGKHDVVLPAEICSIELGQMFKRKAPSDIMPKVLDFASK
RPLDRLRAIEDAASGSVLNYAQSDFVGLAGMKISTTPLKVAGLIMTPPMIGFGNDLGSWN
AVRRKFYKPGRATGLAVVDFSLGPYDVLKRFVDDLVNCCNRLGKSVLDYDCLRISFTLCA
FQLPPLTFNRYAKCVTRPNTARSCPRPHCREYTSTMATYRPNLLVIILPDVAAEAREAVK
LWSDTAAGIPTQCMVEFITTLINARMGGVNFIPRMPISTMIRNTPGLTIVGADVGHPGPG
IDRPSITSLVASYDADLSRYTAFTNVQNPRQEIIADLKDMMLGAFRRVWNCRGRAQTMFP
RCVVFFRDGVSEGEFAQVVTFETVAIQGKEFREEAGAPKELTLKLQFVVVGKRHHFRFFP
DDQAPGHGTDKSGNLQPGLVVDSGITNPFITDFYLQSQGGLKGTSRPAHYIVLKNGLKMV
PAQMYELSYFLCHVYARATRSVSIPAPVYYADLVCTRARMYFEGPVLELASEAGASIDGA
PFDLDEWKRGFRGIHDNIRDQMFFL
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
cggagagcgagggaaatcgtggataagatgcagatagcatacgcgagtgtgtttcaaccc
cgcgcggcattcgatgggaagaaaaacttgtattcttccaaagaaattgctcccggcgga
tctatctcggtaggttccccgacttgcatgcctgcagattttgcttcggctcttaacctg
gttcagatgctaataatgcaggcgccgatgctacattcgaagacatacaatgccagggct
gtgttttcttctattggggccaggcctctcgggggcggactggagatttggcccggattt
ttccattatgccccggggcccctcatttcatttgttctagattttctcaaaatgaccgtt
caagacctcgctaatttagatcctttgagttctcgatggaagcttctgcgagcgacgttg
cacaaagtgaggatcactgttgacgtgcctgtcgggcgacgatcccgtccaatcaaagac
ctcgttccgcgaggcggactctatacattcaaaaagggcgacaggactctgacagtcaag
gatcactatctggaggagcataataaaacccttagctatccacgaatctttggtgtccgc
atgccaggcaaacatgacgtcgtactgcctgcggagatttgcagcattgaacttggtcag
atgttcaagaggaaagcccctagcgacatcatgcccaaggttctcgattttgctagcaag
cggcctctcgaccgcctccgtgcaatcgaagacgcggcatcgggctcggtgttgaactat
gcgcagtcagatttcgttggtctcgcggggatgaagatctcgactactcctttgaaggtt
gctggtctcatcatgacacccccgatgattggattcgggaatgacctgggctcctggaac
gcagtcagacgaaaattctataaaccaggacgtgccacgggcttggctgtcgtcgacttc
tcccttggtccctacgatgtcttgaaaagattcgtggatgatctcgtcaactgttgtaat
agattgggtaagagtgtgttagattatgattgcttgcgcatcagtttcactttgtgtgca
ttccaactccctcctctaacatttaacagatacgcaaagtgcgtcaccagacccaacaca
gctcgctcttgtccaaggccccattgcagggaatatacatcaactatggccacataccgt
ccgaatctgcttgttatcatcttaccggacgtagctgctgaagctagagaggcggtcaag
ttgtggagtgatacagcagccggtattccaacgcaatgcatggtagaattcataactact
ttaattaatgctagaatgggaggcgtcaattttattccaagaatgccgatctcgactatg
attcggaacactccagggctcacaatcgttggtgccgatgtgggtcaccctggccccggg
atagacagaccatccattactagcctcgtagcctcgtacgatgcggacctttcccggtat
acagcattcaccaacgtgcagaacccgagacaagagatcattgcagatctgaaggacatg
atgctgggtgccttccggcgtgtctggaattgcagaggccgagctcaaacgatgttccct
cgatgtgttgtcttcttccgagatggcgtttcagagggcgaatttgcgcaggtggtgacg
tttgaaacggtagccatacaaggtaaagagtttcgcgaggaagcgggagcgcccaaagag
ttgactctcaagctccaattcgtcgtggtcggcaaaagacatcacttcaggttcttccct
gatgatcaagcacccggccatggtaccgataagagtggaaacttgcagccaggtctggtg
gtcgactcggggatcacaaatccgttcataaccgacttctatctgcagtcccagggcggc
ttgaaaggcacaagccgccctgctcactatatcgtacttaaaaatggcctcaagatggta
cctgctcagatgtacgaactatcatattttctctgccatgtctatgccagagccacacgg
tctgtatccatacccgcccctgtctactatgctgatcttgtctgcacgcgtgcgcggatg
tatttcgaagggcccgtcttggaactcgcgtcggaggccggtgccagcatcgatggcgcg
ccattcgacctggacgaatggaagcgaggctttaggggcatccacgacaatatcagagac
caaatgttcttcctgtga
DBGET
integrated database retrieval system
