KEGG   Heterobasidion irregulare: HETIRDRAFT_310016
Entry
HETIRDRAFT_310016 CDS       T03455                                 
Name
(RefSeq) hypothetical protein
  KO
K10755  replication factor C subunit 2/4
Organism
hir  Heterobasidion irregulare
Pathway
hir03030  DNA replication
hir03410  Base excision repair
hir03420  Nucleotide excision repair
hir03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HETIRDRAFT_310016
   03410 Base excision repair
    HETIRDRAFT_310016
   03420 Nucleotide excision repair
    HETIRDRAFT_310016
   03430 Mismatch repair
    HETIRDRAFT_310016
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hir03032]
    HETIRDRAFT_310016
   03036 Chromosome and associated proteins [BR:hir03036]
    HETIRDRAFT_310016
   03400 DNA repair and recombination proteins [BR:hir03400]
    HETIRDRAFT_310016
DNA replication proteins [BR:hir03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    HETIRDRAFT_310016
  DNA Replication Termination Factors
   ELG1-RFC complex
    HETIRDRAFT_310016
Chromosome and associated proteins [BR:hir03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    HETIRDRAFT_310016
DNA repair and recombination proteins [BR:hir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     HETIRDRAFT_310016
  Check point factors
   HRAD17(Rad24)-RFC complex
    HETIRDRAFT_310016
SSDB
Motif
Pfam: AAA Rep_fac_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA_22 AAA_assoc_2 AAA_11 AAA_2 RuvB_N AAA_16 AAA_5 AAA_24 AAA_30 SLFN-g3_helicase AAA_7 AAA_14 Mg_chelatase AAA_19 AAA_28 ResIII bpMoxR DUF815 Cdc6_lid nSTAND3 RNA_helicase
Other DBs
NCBI-GeneID: 20669738
NCBI-ProteinID: XP_009542348
JGI: Hetan2_310016
UniProt: W4KI05
LinkDB
Position
Unknown
AA seq 363 aa
MVANFFQQQSSKKSTEKGEKHVVDSNLQPWVEKYRPKTIDDVSSQEHIIAVLEKTLTSTN
LPHMLFYGPPGTGKTSTILALARQLFGPDNFRSRVLELNASDERGISIVREKIKNFARQT
PRATTVASDGKTYPCPPYKIIILDEADSMTQDAQGALRRIMETYARITRFCLVCNYVTRI
IEPLASRCSKFRFKPLDATSSSARLQHIANDEHITVSPPVLSALISTSNGDLRRAITYLQ
SAARLSAASIPPEPITARDVQEIAGVVPDSIVHDFARALGIETLRGFDLIREKVRMLMRE
GYSASQILSQLHDLIILHPTLASREKSKCALVMAEADKALCDGADEELWILEVALRINKA
ISS
NT seq 1092 nt   +upstreamnt  +downstreamnt
atggtggccaacttcttccagcagcagtcgtcaaagaaatcaacggaaaaaggagaaaag
catgtcgttgattcgaacttacagccctgggtcgaaaaatatcgcccaaagacaattgac
gatgtatcatcacaggagcacatcattgctgtacttgaaaagacattgacttcgacgaat
cttccgcacatgttgttctatggaccgccaggaaccggtaaaacatccacaatccttgct
cttgcacgtcagctttttggccctgacaactttcgctcgcgtgttctggagctcaacgcc
tcggatgagcgtggcatctccatcgtgcgtgagaagatcaagaattttgctcgtcagacc
cctcgagcgactaccgtcgcatccgatggcaaaacatatccctgtccaccttacaaaatc
atcattctcgatgaagcagacagcatgacacaggacgcacaaggtgcgctcaggcgtatc
atggagacctacgcgcgcatcactcgcttctgccttgtatgcaactatgtaactcgaatc
atcgagccgctcgcgtctcgttgctccaaattccgcttcaaaccccttgacgcgacatcc
tcgtccgcccgcctccaacatattgccaacgacgaacacatcactgtttcaccaccggtt
ctttccgcacttatttcaacatccaacggagatcttcgtcgtgccattacatacctccag
tccgcggcccgcttatctgccgcaagcatacctccagaacctatcacagcacgcgatgtc
caagaaatcgcaggcgtcgttccagactcgatagtacacgactttgcgcgcgcgctcggc
attgaaaccctacgcggctttgatttgattcgggaaaaggttagaatgctgatgcgcgag
ggatattcggcgtcgcaaattttgtcccagctgcacgatcttatcatccttcacccgact
ctagcctcacgggagaaatcaaaatgtgcgctggtgatggccgaggctgataaagcgctt
tgtgacggcgcggacgaggagctgtggattctcgaagtcgcacttcgaataaataaagcc
atatcatcatga

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