Heterobasidion irregulare: HETIRDRAFT_312872
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Entry
HETIRDRAFT_312872 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K14560
U3 small nucleolar ribonucleoprotein protein IMP3
Organism
hir
Heterobasidion irregulare
Pathway
hir03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HETIRDRAFT_312872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hir03009
]
HETIRDRAFT_312872
Ribosome biogenesis [BR:
hir03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
HETIRDRAFT_312872
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribosomal_S4
S4
Herpes_LAMP2
Motif
Other DBs
NCBI-GeneID:
20669989
NCBI-ProteinID:
XP_009544107
JGI:
Hetan2_312872
UniProt:
W4KF12
LinkDB
All DBs
Position
Unknown
AA seq
183 aa
AA seq
DB search
MVRQLKHHEQKLLKKVDFLNWKQDANVREIKVMRRYHIQDREDYHRYNKLCGSLRSLAHR
ISLLPAQDPFRTRMEGQILSKLFDMGVLNSQAKLSDVDNKLTVAAFCRRRLAVIMVMAKM
AETVSAAVKFVEQGHVRVGPDTVTDPAYLVTRHMEDFVTWVDTSKLKRTVMTYNDELDDF
DLL
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggttcgccagctcaagcaccacgagcagaagctcctcaagaaggtcgacttcctcaac
tggaagcaagatgccaacgtccgtgaaattaaagtcatgcgcaggtaccacatccaggac
cgggaggactaccacagatacaacaagctctgcggctcgctgaggtccctggcccaccgc
atctcgctgctgcccgcacaagacccgtttcggacgcgcatggagggccagatcctctcc
aagctcttcgacatgggcgtcctcaactcccaggcgaagctcagcgacgtcgacaacaag
cttaccgtcgccgccttctgtcgccgccgtctcgccgtcatcatggtgatggccaagatg
gccgagacggtcagtgcggccgtcaagtttgtcgagcaaggtcacgtccgcgtcgggcca
gacacggtcaccgaccctgcttatctcgtcactcggcacatggaggactttgtgacgtgg
gtcgacacatcgaagctcaagcggacggtcatgacatacaatgacgaactcgacgatttc
gatcttctgtga
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