Heterobasidion irregulare: HETIRDRAFT_314041
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Entry
HETIRDRAFT_314041 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K15219
RNA polymerase I-specific transcription initiation factor RRN7
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hir03021
]
HETIRDRAFT_314041
Transcription machinery [BR:
hir03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
HETIRDRAFT_314041
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
20670084
NCBI-ProteinID:
XP_009543714
JGI:
Hetan2_314041
UniProt:
W4KDR3
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MAPRRRCPVCGSRQWHKEPASGLVICSEGHVLQNYRSEVTEGREFGPHTMHKRTLKSGRK
KREQTSKADPKLYHGARAKYHYFQCLQLLLRKQVAVLMRLWDLPPEFEVVCRDVWTLHLS
FLPAPPPPEPWLHEQDIVGKHSHSQPVTDQKPSEEIGEKNKSEGDSPSDGDSDSSSSSGE
NEEETMQGPLDGELAELLRAMSESSGSSDDENADGTKPRPEPDSRSRKSKFQGASSNADG
PASTIAVLVIACWTLRLPIMYMDLIRLVEMYDLPYLDTLGHLPPEMTRHLTKHTMQRLSP
PHAPTPLLLQALSARLAKRMRASYRIQTPELNAAPLLWRVVRALGGTPVLYGLTKAIAHV
ANLPLTLHHSLAPSLLRMQQHDPESHKYDTVPPEVAFAASVIIVLKMVYGLDGKARVARD
PGDPACALPRMDEYLALIKRLDDEDAKSEASVFGARTNMRTADLSESMLDGYLDFCEKAL
IGPRKQTQGTVIESYFALEGPMRGRESSGDSRGTRAERALQAAVPAEGGEGVGEPGEGYA
IYSSGDVLGSVPEEYEAVVERAARWTGVSGEYIYGVTERYERRVVRWWAGMRRDECRRVD
ATAMTKGS
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcgccccgtcgacgatgccccgtctgcgggtccagacaatggcacaaggagcccgcg
agcggcctggtgatctgcagcgaggggcacgtcctccagaactacaggagcgaggtcacg
gagggcagggagttcggcccccacacgatgcacaagcggacgctcaagtccgggcgcaag
aagcgcgagcagacgagcaaagccgatcctaaattgtaccatggcgcccgcgcgaagtac
cactactttcagtgcctgcagctgctcttgcgcaagcaggtcgccgtgctcatgcggctg
tgggatctcccgcccgagttcgaggtcgtgtgcagagacgtttggacgctgcatctgagc
ttccttcccgcaccgcccccgcccgagccctggcttcacgagcaagacatcgtagggaag
cactctcacagtcaacccgtgactgaccaaaagccatccgaagagataggcgaaaaaaac
aaaagtgagggcgactcgccgtccgacggcgactccgacagctcctcgtcttccggcgaa
aatgaggaggaaaccatgcaagggccgctcgacggcgaactagccgaactcctgcgtgca
atgtccgagtcaagcggctcctctgacgacgagaatgcggacggcacgaaaccgcgccca
gagccggacagccgatcgcggaagagcaagtttcaaggagccagcagcaacgctgacggg
cccgccagtaccatagccgtgctggtcatcgcgtgttggacattacggctcccgatcatg
tacatggatctcatcaggctggtcgaaatgtacgatttgccttacttggacaccctcggc
catcttcctcctgagatgacgcgccatctcacgaaacacacgatgcaacggctttccccc
ccgcacgcccccacgcccctgctcttacaggccctctcagctcgcctggcgaagcggatg
cgcgcttcgtacagaatccagacgcctgagctgaacgccgcgcccctgctctggcgcgtc
gtgcgcgcgctgggcggcacccccgtgctgtacggcctcaccaaggcgatcgcccatgtg
gcgaacctgccgctcacgttacatcattcgctcgcgccgagccttctccggatgcagcaa
cacgacccagagagccacaaatacgacaccgtcccgcccgaagtcgcgtttgcggcttct
gtgatcatcgtgctgaagatggtgtacgggctggacggaaaggcgagggtcgcgagagat
ccaggggatcctgcgtgcgcgctgcctcgaatggacgaatacctagcgttgatcaagcga
ctggacgacgaagacgcgaagagcgaggccagcgttttcggggcgcgcacgaatatgcgc
accgcggatctcagcgaatcgatgctggacgggtatctggatttctgcgagaaagcgctg
atcgggccacggaagcagacgcaaggcacggtcatcgagagctactttgcgctggagggc
ccaatgcgagggagggagtcgagtggggatagccggggcacgagagcagagcgcgcgttg
caggcggctgtgccagcagaaggcggcgagggcgtgggtgagcctggggaagggtatgct
atctatagctctggggacgtgctgggatcggtgccggaggagtacgaggcggtggtggag
cgtgctgcgaggtggacgggggtgagcggggagtacatatacggggtgaccgagaggtac
gagaggcgggtggtgcggtggtgggccgggatgagacgggacgaatgcagacgcgtggac
gcgacggcgatgactaaggggagctga
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