Heterobasidion irregulare: HETIRDRAFT_314577 Help Entry HETIRDRAFT_314577 CDS       T03455                                  Name (RefSeq) hypothetical protein   KO K02999   DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] Organism hir  Heterobasidion irregulare Pathway hir03020   RNA polymerase Brite KEGG Orthology (KO) [BR:hir00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     HETIRDRAFT_314577  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:hir03021]     HETIRDRAFT_314577 Enzymes [BR:hir01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      HETIRDRAFT_314577 Transcription machinery [BR:hir03021]  Eukaryotic type   RNA polymerase I system    RNA polymerase I     Core subunits      HETIRDRAFT_314577 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4 Motif Other DBs NCBI-GeneID:  20670138 NCBI-ProteinID:  XP_009543536 JGI:  Hetan2_314577 UniProt:  W4KER3 LinkDB All DBs Position Unknown AA seq 1729 aa AA seqDB search MNIAHPVPSTVTSISFSFFTTEDVRRISVKQITNPILLDDLNRPNVGGLYDPSLGPAGRQ DICATCQQTYYGCPGHFGHIELPSPVFHPLFMQNTYNLLRATCLFCHHFKLSRPVLIKYA AKLRLLEHGLLEAAKSLDDLQMKVKMRKDEEDDTPEETEHEWATRINLYVQIQLMRASGS KRDNYKDSLVFQARKDLITEFLRTALTKKCSNTGCGAFGYTFRKEGHTKIIELDLTVRQK ATHEALGLRRANVMWGQKGSSSTRDTAEEEDSDVEMPDTEPAGDATLSDEESDEEDTPKV KDDKLPRAANGRVKTLRGRNERIMAPEECRAHLRRLFSNETVLCSLVFGRHGPLAPVNAQ GLSIASADMFFMEVIPVAPTRFRPPAVMGETLFEHPQNELLSKVLNTSYRLRDLNTDLRA ASVKSTDFDDTERRRILGQLLEGLVQLQVDVNSFIDSSKNPAPVRQGKLPPAGVKQGLEK KEGLFRMHMMGKRVNYAARSVISPDVNIEPNEIGIPPVFAQKLTFPEPVTPANFHEMRQL VINGSHKYPGASIVEYEDGHQQFLDKLTVEQRTAIANQLLTPQDDVRNAPRQGLSTRTTS VNKKVYRHLRDGDMLILNRQPTLHKPSMMAHKARVLKGEKTIRMHYANCNSYNADFDGDE MNIHFPQNEVARAEAMMIANTDNQYLVPTSGKPLRGLIQDHVVAGVWMTSQDAFFSREEY FQLLYGALRPEEETSHYSGRLVTLPPTIWRPKPLWTGKQIISTVLLNITPSNAEGLNLTA KAKVPGSAWGPGSGDDQVIFMDGELLRGVLDKSAFGATDYGLVHSVYELYGADVAGRLLG ILSRLFTKFLQHRAFTCRMDDLALTASGDAKRAELIRQGENLGTEGAIDNFPSLASTPAV EQPAALARLLQDVLRDDSKMAGLDMSVKTKLAKLTKSIADACMPHELWRKFPHNHMQAMT LSGAKGTAVNAQQISCALGQQELEGRRVPVMVSGKTLPSFKPFETKAIAGGYIASRFLTG VKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRSLIKHLEGIRVHYDNTVRGADDSVYQFY YGGDALDVTKQKHLYQFAFMAQNAVSFLSRYQVRDIAGKVDDEEAASHMKKVLKRSSKRE LNAPSKRDKYDTAMTMFNPVRFLGSTSEKFAEKLDEYLKANPDKLLKSSDGGAVQVKRRY PLLAAKRLRLLMNFKYMRSIIEPGEAVGLLAGQGVGEPSTQMTLNTFHFAGHGAANVTLG IPRLREIIMTASTKPKTPSMTMTVSKDTPIPVVDAFCKKASRLTLSQVVDSVSVTERLIV SGASRSKHFIIDIKFFPEEEYREEYDVEPVEILQFFGVRFPLLLRREIQLEMKKLDADLK SQIAELGKGKGSSKRGEEAEDGDEEEEEPKRGGRDDDEVSEVGDGDALGEKRKRQAKQQE SYESDSEDEESEGELDDAAIEAAYASQGDDTGSVEDADHKPKAKKGKGLSAMVGKIEESF LDRFPHATAFKFRETGCTIELEFGSDLPKLLLVGIVERTCVKSIVREIPSITDCFRVREP NRDGTVKIMTNGSNFRGIWEFACNDEHSIIDEDDIYSNDVYAILCTYGVEMARAAIVREM SGVFDVYKIDVDIRHMELIADYMTFEGGYKPFNRKGIGMHSSPLLKASFETTASFLSDAT LYGDFDDLRTPSGNLVVGRLSTSGTGVFDVVTPLVQDAGGQNGVVSTQT NT seq 5190 nt NT seq  +upstreamnt  +downstreamnt atgaatatcgctcaccccgtcccgtccactgtcacgagcatatccttctcgttcttcacc acagaggatgtgcgccgcatctctgtcaaacaaatcacaaatccgattctgctcgacgat ctgaaccggccgaacgttggaggtctctatgacccttcactaggtcctgcggggagacag gacatttgcgcaacatgtcaacagacgtactacggctgtcctggacactttggacatatt gagttgccatcccccgttttccacccgttattcatgcaaaatacatacaatctcctccgc gcgacttgtcttttctgtcaccatttcaaacttagtaggccagtgttgatcaagtacgca gccaagcttcgtttattggagcatggtcttctggaggctgcgaagagcttagacgattta cagatgaaggtgaaaatgcggaaggacgaggaggatgacactcctgaggaaacagagcat gaatgggcgacaaggataaatctctatgtccagatccagttgatgcgagcctcggggagc aagcgcgacaattacaaggatagtctcgtcttccaagcaagaaaagatctgatcacggag ttcttgcgaactgccctcacaaaaaagtgctccaataccggatgcggcgcgttcggatat acattccgcaaagaagggcacacgaaaatcatagagctagaccttaccgtcaggcaaaag gccacgcacgaagctttgggactcagacgcgctaacgtcatgtggggccagaagggttct tcatctacaagggacacggcggaggaggaggactctgatgtcgaaatgccggacacggaa cctgcgggcgacgctacgctctctgacgaagaatctgatgaagaagacacgcccaaggta aaagacgacaaacttcctagagccgccaacggacgtgtcaagactttacgaggccggaac gagcgcatcatggctccagaagagtgtcgcgctcaccttcgtcgtctattttctaacgag actgtcttgtgctcacttgttttcggtcgccacggtcctttggctcccgtcaatgcccag ggcttgtcgattgcttcagcagacatgttcttcatggaagtcatccctgttgcgccgacg cggttccgaccaccagccgtcatgggagagacgcttttcgagcatccgcagaatgaactg ttgtcgaaggtgctcaatacgtcatatcgcctccgggacctcaatacggaccttcgcgct gcttccgtcaaatccactgattttgacgacacggagaggcgcaggatcctaggacaactc ttggaagggctagtacaattgcaagttgatgttaatagtttcatcgacagtagcaagaat cccgcgccggtgaggcaggggaagttaccaccagccggtgtgaagcagggtctagagaag aaagagggtctgttccgaatgcatatgatgggcaaacgtgttaattacgcagctcgttcc gtcatatctcccgatgttaacatcgagccaaatgagattggcataccccctgtattcgcg cagaagctcacgttccccgaacctgtcacgccggcaaatttccatgagatgcgccagttg gttatcaacggatcacacaagtatcccggagcgtcaattgtggaatacgaagatggccat caacaattcttggacaaactcacagtagagcagcggacggccattgccaaccagcttctc acccctcaagatgatgtccgcaatgctccccgccagggtctctctactcgaaccacttcg gtcaacaagaaagtataccgacatctcagagatggggacatgctcatcctcaatcgacaa cctacattacacaagccaagcatgatggcacataaagcccgagtcctcaagggtgaaaag acgattcgcatgcattacgcaaattgtaattcttataatgctgacttcgatggagacgaa atgaatatacatttcccccaaaatgaggttgctcgtgcggaagcaatgatgattgccaac acagacaaccaatacctggtacctacgtccggaaaaccattgcgcggtctcattcaagac cacgttgttgctggagtgtggatgaccagccaggatgcattcttctcgcgagaagagtac ttccagctcctttacggtgctctccgaccggaagaagaaacatctcattactctggccgt ttggtgacgctgccaccaacaatatggagacccaaacctttgtggactggaaaacagatt atttccactgtactcttgaatattacaccgagtaatgctgaaggcctcaacctcacagca aaagcgaaggttcctggtagtgcatggggtcccgggtccggtgacgatcaagtcatcttc atggatggcgaactacttcgtggcgttctggataaatccgcattcggtgcaactgattat ggtttagtgcattcagtctacgaactttatggtgccgatgtcgcaggaaggttgttgggc atcctcagccgtttgttcactaaattcctccagcatcgtgcattcacttgtcgtatggac gatttggcattaacagcctcaggtgacgcgaagcgtgcagagctcattcgtcagggcgag aacctgggcactgaaggcgccattgacaatttcccgtcactcgccagtactcccgctgtc gaacagcccgcggctcttgctcgtcttctccaggacgttttgcgcgacgatagcaagatg gctggccttgacatgtccgtgaagaccaaattggcaaaattgacgaagtcgatcgcagac gcatgcatgccccacgaactttggcgcaagtttccgcacaaccacatgcaggctatgacg ctctctggcgcaaagggaactgcagtcaatgctcagcagatttcgtgcgcgctgggacag caggagctggagggtcgtcgtgtccctgtcatggtcagcggaaagacgcttccttccttc aagcccttcgagacgaaggccatcgccggtggttatatcgctagcaggttcttgaccggc gtgaaacctcaagagtttttcttccattgcatggctggtcgcgaaggtctcatcgacact gctgtcaagacttcgcgttctgggtatcttcagcgatcactcatcaaacaccttgagggc atccgcgtccattacgataatacggttcgcggcgctgatgactcggtctaccagttctat tatggtggagatgctttggatgtcacgaaacagaagcacctgtaccagtttgcattcatg gcgcagaatgctgtgtcattcctcagcaggtaccaggtcagggatatcgcaggcaaggtg gacgatgaagaggccgcaagccatatgaagaaggtactcaagagatcgtcgaagcgcgag ctcaacgcgccgtccaagagggacaagtacgatacagctatgacgatgttcaacccagtt cgcttccttggcagcacttctgagaagtttgcagagaaactagacgagtatttgaaggcg aatccggataaactgctcaagtcgtccgacggaggggctgtccaggtcaaacgccgatat cccttactggcagcaaaacgactaaggttgttgatgaacttcaagtatatgcggagcatc atagagcctggcgaggctgttgggctcttggctggccaaggtgttggagagccatcgacg cagatgaccttgaacactttccattttgcaggtcacggagccgcaaacgtcacccttggt atccctcgtcttcgtgaaatcattatgacggcgtccaccaagccaaaaactccatccatg accatgactgtctcgaaggataccccgattccagtagtcgatgccttctgcaaaaaagcc agccgtctcacgctctctcaggtggtcgacagtgtctctgttacagagcgcctgatcgta agtggagcctccaggagcaaacacttcatcatcgatatcaagttcttccctgaggaagaa tacagagaagagtatgacgtcgagcctgtggagatcctgcaattcttcggcgtgcgattc ccacttttattgcgccgcgaaatccaactggagatgaaaaagcttgacgctgatctgaaa agccaaatagcagagctcggcaagggcaagggttcgagcaaacgtggagaggaagctgaa gatggagacgaggaggaggaagagcctaaaagaggtggacgggacgatgacgaggtcagt gaagttggggatggagacgcacttggggagaaaagaaagaggcaggccaagcagcaggag tcgtatgagtcggacagtgaagatgaggagagcgaaggagaactcgatgatgcagccatc gaagctgcgtatgcatcgcaaggggatgatacgggttctgtggaggacgccgaccacaaa ccaaaagcaaagaagggaaaaggtctttcggccatggtcgggaaaattgaagaatccttc ttggaccgtttccctcatgcaacggcatttaagttccgtgagacgggatgtaccattgag ctggagtttgggtcggacctgcccaaattactcttggtaggtatcgtcgaacggacatgc gtaaaatcgatcgtcagggagattcccagtatcacagactgtttccgcgtacgcgagcca aacagagacggcaccgtgaagatcatgaccaatggttccaacttccgtggaatatgggaa tttgcttgtaatgatgagcatagtatcatcgacgaggacgacatatactcgaacgacgtg tatgcaatcttgtgcacatatggggtcgaaatggcgcgcgcggccatagtccgggagatg agcggcgtgttcgatgtatacaagattgacgtcgacatcaggcacatggaactgattgca gactacatgacgttcgagggcggatacaagccattcaatcgcaagggcatagggatgcat tcctcacctttgctcaaagcatcattcgagacaacggcatctttcttgtctgatgcgacg ctatatggcgactttgacgacttgcgaacgccatccgggaacctcgtcgttggaaggcta agtacgagtgggacaggtgtattcgatgtagtcacaccgctagtgcaggatgcgggcggc caaaatggagttgtctctactcagacataa

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