Heterobasidion irregulare: HETIRDRAFT_314721
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Entry
HETIRDRAFT_314721 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K11883
RNA-binding protein NOB1
Organism
hir
Heterobasidion irregulare
Pathway
hir03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HETIRDRAFT_314721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hir03009
]
HETIRDRAFT_314721
03051 Proteasome [BR:
hir03051
]
HETIRDRAFT_314721
Ribosome biogenesis [BR:
hir03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
HETIRDRAFT_314721
Proteasome [BR:
hir03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
HETIRDRAFT_314721
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_NOB1
PIN_6
Zn_ribbon_NUD
Motif
Other DBs
NCBI-GeneID:
20670152
NCBI-ProteinID:
XP_009543850
JGI:
Hetan2_314721
UniProt:
W4KFQ5
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MASSSNPACKYLVLDAGPLLSLSPLRGLAETYLTVPHVLNELKDKRAREHFERLGLSTGV
RVEIRSPDAASLAHAVIQFAKKTGDYSVLSTADLAVLALTYALDIQERKRQDEQILADKV
YTIFDLDVGSVDPAVEEDMEEREPLHVELHPTDENSDVAASSDNLLPSTSDHPISSPSTP
LSSQPSSPAPIFDDPSDDDDGEGEWITPSNVTVHKSRALGLTPPGSGKGKAKEKILVGCM
TADFAMQNVLLQMSLDLVGVEGKKIEKVKTWVLRCHACFKICKDSSKKFCPSCGNPTLLR
ASVTISSPKASSDAPTMQVHLKKNFQYKTRGTIYSIPKPKPGSAKTGNGEGLILREDQTE
YMRAKKQADSKRLRDEKKILNGALLNGGNSDLNVGNWMDPDWIPDIISAGASGKGRTPKG
RKDDMPAIGYGRKNPNERKHHK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcatcctcatcgaacccagcttgcaaatacctcgtattggatgccgggcccctgctt
tcgctatcaccccttcgaggattagccgaaacatatctgacagtcccacacgtcttgaac
gaattaaaggataaacgggcaagagagcatttcgaaagactaggcttgtccactggtgtg
cgagtagagatcaggtctccagatgctgcatctttggctcatgcagtcatccagttcgca
aagaagaccggagattattccgttctttcgactgccgatttggctgtccttgctctaact
tatgccctcgatatccaggagagaaaacggcaggatgagcagatccttgcagacaaggta
tacaccatttttgatcttgacgtaggaagtgtcgatcccgccgtggaagaggatatggag
gaaagagaaccactccatgttgagctgcatccgaccgatgagaacagtgatgtcgctgct
tcatcagacaatctgctaccttccacgagcgaccaccccatttcatcaccctccacaccc
ctctcttctcaacccagctcacccgctcccatctttgatgacccctcggacgacgacgat
ggcgaaggggagtggatcacgccctccaatgttactgtccacaaatctcgcgctctgggc
cttactccccctggatcaggaaagggtaaagcaaaggagaaaatacttgttggctgcatg
acagccgatttcgctatgcaaaacgtgctgctacagatgtcgttggatctagtaggtgtt
gagggaaagaaaatcgagaaggtgaagacttgggtcctacggtgtcatgcttgcttcaaa
atatgtaaagactcgtcgaaaaagttttgcccctcatgtggcaatcccactctccttcga
gcatctgtcactatctcatccccgaaagcatcttcggatgcacctaccatgcaagttcac
ctcaagaagaacttccaatataaaactcgtggaacaatatattccataccaaaaccaaaa
cctgggtcagccaagacgggcaacggagagggattgatcttgcgtgaggatcagacggaa
tatatgagggcaaaaaagcaggccgactcaaagcgtctgcgggacgaaaagaagatattg
aatggggcattgttgaacgggggaaacagtgacctcaacgttggaaactggatggaccct
gattggatacctgatatcatcagtgctggcgccagtgggaagggacgcacacctaagggg
cggaaggatgatatgcccgccattgggtatgggcggaaaaatccaaatgaacgaaagcat
cacaagtga
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