Heterobasidion irregulare: HETIRDRAFT_316253
Help
Entry
HETIRDRAFT_316253 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hir
Heterobasidion irregulare
Pathway
hir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HETIRDRAFT_316253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hir03400
]
HETIRDRAFT_316253
Enzymes [BR:
hir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HETIRDRAFT_316253
DNA repair and recombination proteins [BR:
hir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HETIRDRAFT_316253
Prokaryotic type
HETIRDRAFT_316253
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
DUF7242
Motif
Other DBs
NCBI-GeneID:
20670308
NCBI-ProteinID:
XP_009545178
JGI:
Hetan2_316253
UniProt:
W4KCS9
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MFSSNGSTAGPSNKKQKLTSSSVSSASVSSKAVSSATNFGLQPLNSIPFSLSAFIESLTD
DQKRLLKLEYETMGKSWLKLLKDEIKKSYFTSLKEFLWGEGVKGPDDSAKSLKIYPAPKN
IYAWSNFTPLGKVKVVIIGQDPYHGAGQAHGLSFSVPPNVSVPPSLKNIYTEIQAEYPEF
VPPKHGNLTVWAENGVLMLNTCLTVRAGSPGSHSNHGWEQFTDKVVDVVDRYGGANLPSV
KADDKTGHGRGVVFLAWGAWAAKRVAKLSKNKHLILTSAHPSPFSAHKGFLGNGHFKKAN
DWLEQRYGKDGCVDWCRLDAVI
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgtccaatggcagcaccgccgggcctagcaacaaaaaacagaaactcaccagc
tccagcgtgtcatctgcttccgtgtcctccaaggcggtgtcctcggcgacaaactttgga
ctgcagccgttgaattcaataccattctcactctccgcattcatcgagtctctcaccgat
gaccagaagaggctgctcaagctcgaatacgagacaatggggaagagctggcttaagctt
ctcaaagatgaaatcaagaaatcttatttcacatcgctgaaagagttcctctggggcgaa
ggcgtcaaaggtcctgatgacagcgcgaagtcgctaaaaatataccctgcgcccaaaaac
atctacgcctggtccaactttacccctctcggaaaggtgaaggtggtcatcatcggccag
gatccgtatcatggagccggtcaggcgcatgggctctcgttttctgttcctcccaacgtt
tctgttcctccctcgctgaaaaacatatacacggaaatacaagcggagtatccggagttc
gttccgccgaagcatgggaacttgacagtgtgggccgaaaacggcgtccttatgttgaat
acgtgcttgacggtccgagcgggttcccctggctcgcactcgaaccacggctgggagcag
ttcacagacaaagtcgtcgacgtcgtcgatcgctacggcggcgcaaacctgccctctgtg
aaagctgacgataagacaggtcacggccgcggtgtcgtctttctcgcctggggtgcttgg
gctgcaaagcgagtcgccaagctgagcaagaacaaacatctcatcttgaccagtgcccac
ccctcccccttcagcgcacacaaagggtttctagggaacggccacttcaagaaagccaac
gactggttggagcaacggtacggaaaagatggctgcgttgactggtgccgcttggatgca
gtcatatga
DBGET
integrated database retrieval system
