Heterobasidion irregulare: HETIRDRAFT_316471
Help
Entry
HETIRDRAFT_316471 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hir
Heterobasidion irregulare
Pathway
hir03420
Nucleotide excision repair
hir03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HETIRDRAFT_316471
03430 Mismatch repair
HETIRDRAFT_316471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hir03400
]
HETIRDRAFT_316471
Enzymes [BR:
hir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HETIRDRAFT_316471
DNA repair and recombination proteins [BR:
hir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HETIRDRAFT_316471
MMR (mismatch excision repair)
Other MMR factors
HETIRDRAFT_316471
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
20670335
NCBI-ProteinID:
XP_009545268
JGI:
Hetan2_316471
UniProt:
W4KCA9
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MSLTILESLNAAQIKAVRHPPNKPLQILAGPGSGKTKAGTFCSVLTSRIAYLILEHSIPA
SSICAVTFTNKAANEMKERLKKMIGDDQTNMLKMGTFHAFCVPFLRKHAKSISIQSNFTI
CDAAESQKIITKLLKSYADYIQEHAVALSDGQTQSAISKAKSKGQSPEDMAKLHAEAKAK
SGRASPYLTVLIEIFRDYERILRQNNSLDFDDLLVFGTKLFQQHPDVVSWCRHVLVDEFQ
DTNSIQYELMKTIASSHHCVTVVGDPDQSIYGWRSADITNLQNMERDFPATSQILLEDNY
RSTASILALSLAIISKDKSRISKSLRTSHPAGISPVLQSFGSDSNEAIFMATEIKRLVAA
SGGMFKWSDFAILLRFNALSRVIESALQKEGIPNRVLGGHKFFERMEVKDILAYLQVVDN
SLFVPAFMRVINVPPRGIGKKSVAEIVARAEKAKCSPLELVEQIHDGKIPDIKPPVKRKI
GSFVTTIRSLRKYDNERESPPDLIRRLLDLIEYGQYLKKTEDWASRWENVHELINFASQI
HESLNTDINFDQLLPQSHDTDDDLRGELEYEGFVTGNKSAKAKGKEKAPDLPIETPLRAF
LQASMLSTDTEETDDDSNEKVTISTCHSAKGLEWPVVMVPGAISFRSTERKTRKKKGEFY
RMPGHLCTDSAIKQNCRRLLYVACTRAQSLLYLQHTTGRGIAGDNQPRELSPFISAVTAD
NWNLFSSHPPNLSVTDLEAIAIVLGRPCPDQSEVRKRMLEWERTGAQTRQAEAKLDFNIA
GPWSRADPPASAAFTTSRSILVPANSTLTSQNPSTESKPPSTKSKPPSTKSKPSSTMSES
SIINVGPPRRGLTSALAKESVSTNLSDRNASRSWPTKPTSANDGFLPSFPKPLLSVSSAP
ELPVGSTTGLVSGSKRRLGMGRPAIEYPNKKFKTPV
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgtccctaactatacttgagtctctcaacgctgcacaaataaaggcggtgcggcaccca
ccgaataaaccgctgcaaattctggcaggtccaggaagtggcaagacgaaggcaggcaca
ttctgctcagtgctaacgtctcgtatcgcctacctcatcttggagcactcgatccctgcc
tcatctatatgcgctgttaccttcaccaacaaggctgcaaacgagatgaaggagcgactg
aaaaaaatgattggagatgatcaaacaaacatgttgaagatgggaacgttccacgccttc
tgtgttccatttttgaggaagcatgcaaagtcaatatctattcaaagtaattttacaata
tgtgacgcggctgaaagtcaaaagattatcaccaagctcctgaagtcttatgctgattat
atccaggaacacgcagtagcactgagcgatggtcaaacacaatcagcaatctcgaaggcg
aaatccaaaggccaaagcccagaggatatggcaaagctacacgctgaggccaaggcgaaa
tcgggtagagcatccccatatctcacggtgctgattgaaatctttcgagattatgaacgg
atattgcgacagaataacagcctagactttgatgatttgctagtttttggcacgaaactt
tttcaacaacatcctgacgtcgtatcctggtgccgtcatgtcctcgtggatgagttccag
gacaccaacagtattcagtatgaacttatgaaaacaattgcatcgtcccaccactgcgta
acggtcgtcggggatccagatcagtctatctatgggtggcgatccgcagatataacaaat
ctccagaatatggaacgagattttcccgctacttcccagattcttcttgaagataattat
cgttcaactgcctcaattctggcgctgagcttggctatcatctccaaagacaaatcccgc
atttcgaaatctctccgaacgtcacatccggcagggatcagccctgtgttacagtctttt
ggatctgacagcaacgaagctatatttatggccactgagatcaaacgcctcgtcgccgct
agcgggggaatgttcaagtggagtgattttgcaatccttctacgtttcaatgcattgtct
cgggtaatagagtcagcattgcaaaaggagggcatacccaacagagtcctaggaggacat
aaattcttcgagcgaatggaggtgaaagatattctcgcttatctgcaagtagtcgacaac
tcgttgttcgtgccagctttcatgcgtgtcatcaatgttccccctcgaggtataggcaag
aagtctgttgcagagattgtcgcacgtgcggagaaggccaagtgttcaccccttgaactc
gtggaacaaattcatgatggcaagatcccagatatcaagccgcctgtcaagcgtaagatt
gggtcctttgtcacaactatacgcagtctccgcaaatatgacaacgagcgagaatcgccc
cccgatctaattcgtcgccttcttgatctgatcgaatacggacagtatctcaagaagacg
gaagactgggcgagccgatgggagaatgttcacgagttgatcaattttgctagccaaatt
catgaaagcctcaatacggacataaacttcgaccagctactaccacaatcacacgacaca
gacgatgatttgaggggcgagctggagtatgagggatttgtcacgggaaacaagagtgcg
aaggccaaaggcaaagagaaggcaccagacttaccaatagagaccccccttcgagcattc
cttcaggcttcaatgctatcgacagatactgaagaaacagacgatgattcaaatgagaaa
gtgaccatatccacttgccactcggcgaagggattagagtggccagtggtcatggtacct
ggtgccatatctttccgttctaccgagcggaagacgcggaagaagaaaggcgagttttat
cggatgcctgggcatttgtgcactgacagtgcaatcaaacaaaattgtagacgtcttctc
tacgtggcttgtacacgggcgcaaagtcttctatatctgcagcatacaactggtcgtggc
atcgcaggggacaatcagccaagggaactttcgccctttatttcagccgttacggcagat
aattggaatctattttcgtcccatccaccaaatctatcggtcactgaccttgaggcgata
gcaatagttctgggtagaccatgccctgatcagagcgaagtccgaaaacgtatgctcgag
tgggagcgtaccggggcgcagacccgccaggcagaagcgaagttggattttaatattgct
ggaccatggtctcgcgcagatcctccagcctcagcggccttcacaacttcgaggagtatt
cttgtgccagcgaattcaacacttacgagtcagaacccaagtacggagtcgaaacctccc
agtacgaaatcgaaaccacccagtacgaaatcgaaaccatcaagcaccatgtcagaatca
tcaatcatcaacgtgggaccaccacgacgaggcctcacatcagcgctcgcgaaggaatct
gtctctacgaacttgtctgaccggaacgcctcacgatcatggcccaccaaaccgacctcc
gcaaatgatgggtttctccccagcttcccaaagcccttgctgagtgtcagttcagcacct
gagctccctgtaggcagcacaactggccttgtcagtggaagcaagcgaagactaggaatg
ggacggcctgcgattgaatatcctaacaagaaattcaaaacgcctgtttaa
DBGET
integrated database retrieval system
