Heterobasidion irregulare: HETIRDRAFT_320170
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Entry
HETIRDRAFT_320170 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K20360
TBC1 domain family member 2
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hir04131
]
HETIRDRAFT_320170
Membrane trafficking [BR:
hir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
HETIRDRAFT_320170
Retrieval pathways
HETIRDRAFT_320170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
20670648
NCBI-ProteinID:
XP_009547558
JGI:
Hetan2_320170
UniProt:
W4K541
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MDPEFAETFVSTKSRQKPNTIREDAQEIVNGTSTRYSYCFQTLIQCLDPLHLVRRRTSKR
PNAGSRSRSHSPAHGARSPERLIREHSIRTNRRHKFIECLMREDVDMAELRKLAWSGVPN
ELRPLAWQLLLGYLPLPTRLRSSTLERKRGEYLSLVGLTFARGREGLDQQIWHQIEIDVP
RTRPGVQLWMYRATQRSLERILYVWAIRHPASGYVQGINDLVTPFFQIFLSAYIDSDPES
FDPSLLPESVLDAIEADSFWCLSRLLDGIQDNYISAQPGIQRSVRRMSELVARIDAPLHE
HLAAQNVEFIQFAFRWMNCLLMREISVKNTIRMWDTYLAEGPDAFSQFHLYVCSAFLVRW
SEKLREMDFQGIIMFLQSLPTQDWTDHEIEMLLSQAFVLNSIWQNAQSHFTGK
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggacccagagtttgcagagacgtttgtgtccacaaaatccaggcagaagcccaacacg
atcagagaggatgctcaagagatcgtgaacggtacttcgactcgatattcttactgcttc
cagaccctcattcaatgtctagatcccttgcatcttgtccgacgccgaacatcgaagcgg
ccaaatgcaggttcccgttcgagatcacattcgcccgctcatggcgcgcgatctcctgaa
agattgatacgggaacattcaatacgtaccaaccgccgtcataagtttattgagtgtctc
atgcgtgaggatgtcgacatggccgagttgcgaaagcttgcctggtcgggcgtcccgaac
gagctgcgcccgctggcatggcaattacttctgggctaccttccgctgccgacacgactt
cgctcgtcgacgctagaacgaaagcgaggagaatacttgtcgttagtaggcttgaccttt
gcgcgaggccgcgagggcctcgaccaacaaatatggcaccaaatagagatcgacgttcca
agaacacggccaggcgtgcagctatggatgtaccgtgcgacacaacgaagcttggaacgc
atcctgtacgtgtgggcaatacggcatccggccagtggctatgtgcaggggatcaacgat
ctcgtcacgcccttctttcaaatatttctttccgcttacatcgactcggatccagaatcg
ttcgacccgtcactgctgccggagtccgtgctcgatgcgatcgaggcggactcgttctgg
tgcctttcacggctgctggacggcattcaagataactacatctccgcccagccgggcatt
cagcgcagcgtgcgacgcatgtcggagctggtcgcgcggatcgacgcaccgctgcacgag
cacctcgccgcgcagaacgtcgagttcatccagttcgcgtttcggtggatgaattgcctg
ctgatgcgggagatcagcgtgaagaacacgattcgcatgtgggacacgtatctggcggaa
ggtcccgacgcgttctcgcagttccacctgtacgtctgttctgcgtttctcgtgcgatgg
agtgagaaattgcgtgagatggactttcaggggatcatcatgttcctccaatcgctgccg
acgcaagactggacggaccacgagatcgagatgctgctcagtcaagcattcgtgcttaat
tccatctggcagaacgcgcagagccacttcacgggcaagtga
DBGET
integrated database retrieval system
