Heterobasidion irregulare: HETIRDRAFT_320868
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Entry
HETIRDRAFT_320868 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K08489
syntaxin 16
Organism
hir
Heterobasidion irregulare
Pathway
hir04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
HETIRDRAFT_320868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hir04131
]
HETIRDRAFT_320868
Membrane trafficking [BR:
hir04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
HETIRDRAFT_320868
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
VMAP-M20
DUF1359
RNase_H
Motif
Other DBs
NCBI-GeneID:
20670699
NCBI-ProteinID:
XP_009547354
JGI:
Hetan2_320868
UniProt:
W4K460
LinkDB
All DBs
Position
Unknown
AA seq
412 aa
AA seq
DB search
MSSAPSTSSAASAPTTRSRTLLFISYRDSSARSSRFARTAHYDDAHDEREGLIDAGPGHI
SLDVQLPPKWYVVDLAEQVEDILAGTQAKISALDRLHAKHVLPGFTDRTTEEREIEAATS
EITKDFRHCQSLIQRILSDAAHAFPPASLDAQRHQALAAKNVQRGLAAKVQDLSAAFRKK
QRVYMEKLQGHAIKNQDLLIASGVTSLKGSEGLSAVDDDVEAASRTGQYTSQQLLEPDLD
LRARDRELTEIAKSIGTLAELFKDLSALVIDQGTLLDSVEYNIEQTATHVSEAAKELEVA
TRYQKNTGKRKCIFLLLLIIFGLVVVLIFKPRSHGAVAAPIASLAPTPAPSDLPSPSSSS
SFEQQPPLAPRARPGPHPNSILDANLNPPIAPARHRLPEARHGLRARRRAPR
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgccccgtccacctcgtccgccgcttcagcacccacaacccgctctcgcacc
cttctcttcatatcctatcgcgactcgagcgcccgctcctcgcgcttcgcccgcacagcc
cattacgacgacgcccacgacgagcgcgagggcctcattgacgcgggccccggccacatc
tcccttgacgtacaattgccccccaaatggtacgtggttgacctcgccgagcaggtcgag
gacatcctcgccgggacacaggccaaaatctccgcgctggaccgcctgcacgcgaaacac
gtcttgcccggcttcacggaccggaccacagaagagcgggaaatcgaagccgcgacgtcc
gagatcaccaaagacttccgccactgccagtccctcatccagcgcatcctctccgacgcc
gcccatgccttcccccccgcctccctcgacgcccagcgtcaccaggccctcgccgcgaag
aacgtacagcgcggcctcgccgcaaaggtccaggacctcagcgccgcctttcgcaagaaa
caacgcgtctacatggaaaaactccagggtcatgcgatcaagaaccaggacctcctcatc
gcgtcgggcgtcacctccctaaagggctcagaaggcctctcggccgtcgatgacgacgtc
gaagcggcctctcgcacaggccaatacacgtctcagcagcttctcgagccagacctcgac
ctgcgcgcccgcgaccgcgagctgaccgagattgcgaaatctatcggcaccctcgcagag
ctcttcaaagacttgtcggcgctcgtcatcgaccagggcaccctcctcgacagcgtcgag
tacaacatcgagcagaccgccacccacgtcagcgaggccgccaaagagctcgaggtcgcg
acccggtaccagaagaacacgggcaagcggaaatgcatcttcctcctcctgctcatcatc
ttcggcctcgtcgtcgtcctcatcttcaagccccgcagccacggcgccgtcgccgctccc
atcgcttctctcgcacccacgccggcgccctcggatctgccctccccatcatcatcatca
tccttcgagcagcagccgcccctggccccgcgtgcccgtccgggcccacacccaaactct
atcctcgacgcgaaccttaaccctcccatcgcccccgcgcgccatcgccttccggaagcg
cgccacgggcttcgcgcgaggcgacgggcgccgcgctga
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