Heterobasidion irregulare: HETIRDRAFT_321272
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Entry
HETIRDRAFT_321272 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
hir
Heterobasidion irregulare
Pathway
hir04138
Autophagy - yeast
hir04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
HETIRDRAFT_321272
04148 Efferocytosis
HETIRDRAFT_321272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hir04131
]
HETIRDRAFT_321272
Membrane trafficking [BR:
hir04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
HETIRDRAFT_321272
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
TPR_VPS8_2
VPS8_N
RMC1_N
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
Beta-prop_WDR3_1st
zf-RING_Vps41
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
20670735
NCBI-ProteinID:
XP_009547466
JGI:
Hetan2_321272
UniProt:
W4K6S0
LinkDB
All DBs
Position
Unknown
AA seq
1280 aa
AA seq
DB search
MNPHLWSEHDPCFLAEQAVGPVTALALSHDHTFVATGHAFGHIQVFDLNKPQKPVRFVPP
TSRAAVASGRKEGHIHGSRIVNVGFVAGRHTAIVSADENGLAFYHSLGKVLFVDASDVLR
ILGKYPEEEPPPSSHLSQSKTNGIAPGQYPRHRKARKVNTILAMAPLPLGTTPHPTDGYN
IVALLTAAKLVIVGLKPSPKTWYRRHRDEDGELARKSKFRGSMAWYPSIILGGASPREPP
RKGKKEPTIEPTIPMLVYSWGPTLNLLRVSEIKVKEAIVDSRTNKSTSVEVGRLTFQEAA
KWSAQDDVLAIQWLNANQIVVVTSSALEVYDIQTLDLVEHTRFDAASLISPTLGNTSNGT
ISYSDSLGDIAHSVRAYKGKVFLLCRNEVRVGTLLTWADRILSFVHDGDFLSAIDLAREY
YLGKAPGNKNGLPDNPQQLRQVTEEKMRELMVASTRYAFSEDRMMDATHYTPDGRGVDRT
SFFENLVSTCARACIALDDFEFLFEDLFQAYDDVGITRIYLKQLEVFVLDNDIRYVPPRI
TQRLIDMHKNDYRADLAERVIWHIDPECLDINQAIHLCREYQLYDALIYVYTRAMKDYVL
PVVEMLGLIRKVIQYRRDSTLKGTYEVTMEPVVMNAYKVYPYLADALTGLTYPSEEPLNE
EEALQAKHDVYTFIFFGRSSVWPLKEGGKLVLTAEEEGGVEPTYPYCRLLLRFDAEAFLH
SLDIAFEDTYLNDESQGASRLIVIKVLLEILASSPGLSPADITFVNIFIARNVPKYPQFI
QIAPSALHNILVGLANDPDETTREDRQLAAEYLLSTYTPDESDRLLRLFEKAKFYRILRS
WHRHERQWGPLLLAYLHDHDLPSDDVFNNANEIFKLASSANQGTIPSDLITTISDSLPDF
MQANIINTAFLVDNHVPQLHVRALEVLGSSTNHKCFAYLHCLLGSPSEEDEGPSSQSGHP
SKNVPPAMRQLYLSLQCQIDATNVIPTLQNFPPEFVPWNDIIRICEEHNVFDAVVWALNR
QGAATESIQKVETFSRRLVSKIAQELVALSDSQYRQSDLQEQISSLKTLGRMAVSVCLEH
SRSESGDIPVEELWFQLLRSQIDSVQAVSGCCSSQALSSSDVEIAQRESLFALRALIQET
FSSLVSVSSSRGVSFPRLFTRLVDSTSHTANGTPYTEFRTILTSMMESYRSEGDILTITK
HLFDRDVFEIVETMTKERAKGWAPHRGTCTHCRSVLSLAMQPSASSRGATEDKIKIVVSR
TGAIYHSTCLPSDFLSNTVH
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgaatccacatctttggtctgaacacgacccgtgttttctcgcagaacaagccgtagga
ccagtcactgctcttgctctgtctcacgaccatacatttgtggccacaggacacgcgttt
gggcacattcaagtttttgacctcaacaagcctcagaagcctgttcgctttgtgcctcca
acatcccgcgctgccgttgcctcaggacgaaaggaaggtcatatacatggctcaagaata
gtaaatgtcggattcgtcgcagggagacataccgctatcgtgtccgcggacgagaatggc
ttggctttctatcacagcttaggcaaggtgctcttcgtcgatgcttctgatgtgttgcgg
atacttggtaaatatcccgaagaggagccacccccatcatcacacctttcccagtcaaag
acgaatggtatcgctccaggtcaatatcctcgtcaccgcaaagcccggaaggtcaataca
atactcgccatggctcctcttcctcttgggacaacccctcatcccacggacggatataat
attgtcgctcttctgactgccgctaagctcgtcatagtcggcttgaaaccgtctccaaaa
acatggtacagacgtcaccgagatgaagacggcgaactggcgcgaaaatcaaagtttcga
gggtcgatggcttggtatcctagcattattctaggcggtgcgagcccacgggagccgcca
aggaaggggaaaaaagagcctaccatcgagcctactattccgatgcttgtctattcctgg
ggtcccactctcaacctcttgcgtgtctcagagatcaaggtaaaggaggcaattgtggac
tcaaggacaaataaatcaaccagtgtcgaggttgggcgattgacgttccaagaggcggcg
aaatggtccgcgcaggatgacgttctcgctattcaatggttaaatgccaatcaaattgtt
gttgtcacatcttctgcgttggaagtttacgacatccaaacacttgatctggtcgaacac
acccgtttcgatgccgcttcactgatctcaccgacgttaggcaatacctcaaatggaact
atttcctattcggattccttgggcgatattgcccatagcgtgcgcgcgtataaagggaag
gttttccttctttgtcggaacgaagtacgagtgggcacactcctcacttgggcagatcga
atattgtcgttcgttcatgacggtgattttctcagtgcgatcgacttggctcgggaatat
tacttgggcaaagcacctggaaacaagaatggactgccagataacccacagcagctcaga
caagtcaccgaagagaagatgcgagagctcatggtcgcctccacccgctatgcattctcg
gaagaccgcatgatggacgcaactcactatacacctgatggtcgcggagtggatcggaca
tcttttttcgaaaatctggtatccacctgcgctcgtgcttgcattgctctagacgatttc
gaattcctcttcgaggatttgttccaggcatacgatgacgtcgggattacacgaatctat
ctcaaacaattggaggtgttcgtgctcgacaacgatatccgctatgtcccaccacgaatc
acgcagcgtttaatcgatatgcacaagaacgactatcgagcggacctagctgaacgtgtt
atttggcacatcgatccagaatgcttggatatcaatcaagcgatccacctgtgtagggaa
tatcagttgtatgatgctctcatctacgtctacactcgagcgatgaaggattacgtgtta
cctgtagtcgaaatgctaggcctcattcgcaaggttatccaatatcgtcgggactcgaca
ttgaaagggacgtatgaagtgacgatggagcccgtcgtcatgaacgcgtacaaagtctat
ccctatctcgcggatgccttgacaggtcttacctaccctagcgaggaacctttgaatgaa
gaggaggcattacaggctaagcatgacgtctacactttcatcttcttcggtcgctcgagt
gtctggccacttaaagagggaggaaagttggtcttgactgcagaggaggaaggcggtgtg
gaaccaacctatccgtattgtcggctcttacttcggttcgatgcggaagcatttcttcat
tcattggacatcgccttcgaagatacgtacctaaacgacgaaagtcagggagccagtcgt
ttgatcgtcatcaaggtcttgctcgaaatactcgcgtcatctcccgggttgtctcccgcc
gacatcacctttgtcaatatcttcattgcccgcaatgttcccaaataccctcaattcatc
caaattgccccgagcgcgctgcataatattcttgtggggctcgcaaatgatccggacgag
accactcgggaggatcgccaacttgctgcagagtatctgctgtccacttatactccggat
gagagtgatcgccttcttcgactattcgagaaggcaaagttctaccgcatactccgttcg
tggcatcgacacgagcgccaatgggggccattacttctagcttaccttcacgaccatgac
ctgccttccgacgatgtgttcaacaatgctaacgagatcttcaagcttgcctcctcggca
aatcagggcaccataccctcagatctcatcactaccatttccgactcattgcctgacttt
atgcaagccaacatcatcaacacggcttttttggtcgataatcatgtgccgcagcttcat
gtcagggcgctggaggttctcggctcgagcacgaaccacaaatgctttgcgtacttgcat
tgtcttctgggttcaccttctgaagaagatgaaggcccttcttcacaatcaggacaccct
tccaagaatgttcctccagctatgcgacaactttacctctctctacagtgtcaaatcgac
gcaacgaatgtcatccctactcttcaaaatttcccacccgagtttgttccgtggaacgat
attattcgaatatgtgaggagcacaacgtattcgacgcagtcgtttgggccttgaatcgc
caaggcgccgcgacagaatccatacagaaggttgagacctttagccgccgtttggtgtct
aaaatagcacaagaactggttgcgttatcggactcacaataccggcagtcagacttgcag
gagcagatatcctctttgaagacactcggacggatggctgtgtcggtctgcttggagcac
tctcgatccgagtctggagatatcccagtcgaagagctgtggttccagctattgcggtcg
caaatcgactcagtacaggctgtgtctggctgttgttcttcacaagcgttatcctctagt
gacgtggagatagcccagcgggaatcattgttcgccctccgtgcgctcattcaagaaaca
ttctcatcgctggtgtcagtcagctcatccagaggtgtctccttccctcgcctctttacg
cgccttgtcgattctacatcgcatacagccaacggcacgccgtatacagaatttcgcact
attttaacgagcatgatggaatcctatcgatctgaaggcgacatattgacgatcacaaaa
cacttgttcgatcgggatgtgttcgagatagtggagacgatgaccaaggagcgagcaaag
ggttgggcacctcacagaggaacgtgtacacactgccgaagtgttttaagtcttgccatg
cagccatccgcgtcatcaaggggtgcgacggaggataagattaagattgttgtttcacgg
acaggagctatatatcacagtacatgtctaccatcagactttctttccaacactgtacat
taa
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integrated database retrieval system
