Heterobasidion irregulare: HETIRDRAFT_325076
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Entry
HETIRDRAFT_325076 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
hir
Heterobasidion irregulare
Pathway
hir03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
HETIRDRAFT_325076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hir03021
]
HETIRDRAFT_325076
03036 Chromosome and associated proteins [BR:
hir03036
]
HETIRDRAFT_325076
Transcription machinery [BR:
hir03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
HETIRDRAFT_325076
Chromosome and associated proteins [BR:
hir03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
HETIRDRAFT_325076
PBAF complex
HETIRDRAFT_325076
GBAF(ncBAF) complex
HETIRDRAFT_325076
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Roughex
Motif
Other DBs
NCBI-GeneID:
20671109
NCBI-ProteinID:
XP_009549993
JGI:
Hetan2_325076
UniProt:
W4JYP4
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MDSPKRSASPSSSSDPKRIKLTVQPQNQGVSSVDPENAPGKRSELEPIQSGELGNLPNYP
ESKPGLENEEGESGEENDDEDPAQLEANRQRLEEQARKYLAAQTHEVIIPSYSAWFDMSK
IHPVERRALPEFFNSRNRSKTPAIYKDYRDFMINTYRLRPTEYLTVTACRRNLAGDVCAI
MRVHAFLEQWGLINYQIDPEARPATLAPPFTGHFRVILDTPRGLQSLHPGTRPSQHPSVN
GVSKPLSAAPASLELRSNIYQTSSKSSRPIGEAEANTLANGASAPNGISGRSVATVTYKC
DTCGVDCTAVRYHSLKVKDFELCQPCYLDGRFPSTMFSGDFVKLTSGVGAGGNAHGAGSG
DAWTDQELLLLLEGVEMYDDDWSAIEEHVGSRSAQQCIRKFLELPIEDPYLSSEGEMGAL
RYARVPFEQADNPVMSVVAFLAGVVGPGVAAEAAKTALHELTNKDEDEKPVVEQEKDGKK
DQEADDKMDEDAPAEVPAHAASSSNAGSPAPSAKPPSESAVSGIPHSKVVRAANLALKSS
AKAAAALADAEETQVRSALAAVIKLTLTKLELKMAQFEELEDLLEEERRSLEITRVALVT
ERLGLQRTLESVNVELGKHATAIAAGNMNGNTAGMAAAVSQASLGTTGQGTRASEVQGGA
PTEGDMGPLSGGNVAALS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggactctccaaagcgctccgcttcgccatcttcatcctcagatccgaagcgtatcaag
ctaaccgtccagccacaaaaccaaggcgtttcatccgtagatcccgaaaatgctcccgga
aaacgtagtgagctcgaacccatccaaagcggagagcttgggaacctccccaactatcct
gaatcgaagcctggcctcgaaaacgaggagggggagtcgggtgaagaaaacgacgacgag
gatccggcgcagcttgaagctaataggcaaagactcgaagaacaggcgcgcaaatatctc
gcggctcagactcacgaggttatcatcccctcgtattctgcttggtttgacatgtccaag
atacatcctgtcgagcgacgtgctcttcctgagttcttcaactctcgtaacagatcaaaa
acgccggcgatctacaaggactatcgcgactttatgatcaacacctaccgcctcagacca
accgaatatctcactgtcaccgcgtgccgtcggaacttggcaggagatgtgtgcgccatc
atgcgtgttcacgcttttcttgaacagtggggtttgatcaactaccagatcgaccccgaa
gcgcggccagccacgctggctcctccatttacaggacacttccgcgttatccttgatacc
cctcgtggactacagtcactgcatccgggaacgcgtccttcccaacacccgtccgtcaat
ggtgtttcaaaacctctctcagcagctcccgcctccctcgagctgcgttctaacatctac
cagacttcttcaaaatcgtcacggcctattggcgaagccgaagctaacacccttgccaac
ggagcctccgccccaaatggcatctctggccgaagcgttgcaacggtgacctacaagtgc
gacacctgcggcgtcgattgcacagcagttcggtatcactcgctcaaggtcaaggacttc
gagctgtgccagccatgctacctcgacggacggttcccctcgacgatgttcagcggagac
ttcgtcaagctgaccagcggggtgggtgcgggtgggaacgcgcacggcgccgggagtggg
gacgcgtggacagatcaggagcttctgctgctgctggagggcgtggaaatgtacgacgac
gactggtccgcgatcgaggagcacgtcggctcgcgctctgcccagcaatgtatccgcaag
ttcttggagcttccgatcgaagacccgtatctgtcgagcgagggcgagatgggcgcgctc
cgctacgcacgggtacccttcgagcaagcggacaacccggtgatgagcgtcgtggcattt
ttggcaggggtcgtcgggcccggcgtcgccgcggaggccgccaagacagcgcttcacgag
ctgacgaacaaggacgaggacgagaagcccgtggtagagcaggagaaagacggtaagaaa
gaccaggaggccgatgacaagatggacgaggacgcgccagccgaagtaccggcccacgca
gcctcctcgagcaacgcaggttcacccgccccatccgcaaagccgccgtccgaatccgcc
gtctccggcatcccgcactccaaagtcgtccgcgcggcgaacctcgcgctcaagtcgtcc
gccaaagccgccgccgcgctcgccgacgccgaggagacgcaggtccgctcagcgctcgcg
gcggtgatcaagctcacgctaacgaagctcgagctgaagatggcgcagttcgaggagctc
gaggacctgctcgaggaagagcgccggtcgctcgagatcacgcgcgtcgcgctcgtcacc
gagcgccttgggctgcagcgcaccctggaatctgtgaatgtcgagctgggcaagcacgcc
accgccatcgccgctggaaacatgaacggaaacaccgctggcatggccgccgcagtttca
caagcaagcctcggcacgacagggcaagggacgcgagcgagcgaagtgcaggggggcgcg
ccgacagagggcgacatgggtccactcagcggtggcaacgttgcggcactgtcctga
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integrated database retrieval system
