Heterobasidion irregulare: HETIRDRAFT_327725
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Entry
HETIRDRAFT_327725 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K10865
double-strand break repair protein MRE11
Organism
hir
Heterobasidion irregulare
Pathway
hir03440
Homologous recombination
hir03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HETIRDRAFT_327725
03450 Non-homologous end-joining
HETIRDRAFT_327725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hir03032
]
HETIRDRAFT_327725
03400 DNA repair and recombination proteins [BR:
hir03400
]
HETIRDRAFT_327725
DNA replication proteins [BR:
hir03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
HETIRDRAFT_327725
DNA repair and recombination proteins [BR:
hir03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
HETIRDRAFT_327725
BRCA1-C complex
HETIRDRAFT_327725
NHEJ (non-homologous end-joining)
MRX complex
HETIRDRAFT_327725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Motif
Other DBs
NCBI-GeneID:
20671356
NCBI-ProteinID:
XP_009550781
JGI:
Hetan2_327725
UniProt:
W4JWI4
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MSDSEFLPPQPTIRNSFLDDTIRIMLATDNHIGYLERDPIRGQDSINTFKEILQLAVKND
VDFILLAGDLFHENRPSRDCLYQVMALLREYTLGDKPVEIELMSDPDEGKAAGFSFPAIN
YEDGNFNVGIPVFSIHGNHDDPQGAGPEGALCALDMLSVSGLVNYIGKLDLPLNDAPTEG
IAVRPVLLRKGNTHLGMYGIGNVKDARMHFELRSNRVRMYMPRDKENWFNLMLLHQNRVR
HGPQESVPEGMFDDNIDLVIWGHEHDCRIVPEPVAGKRYYISQPGSSVATSLAEGESLEK
HVALVKIQGKEFELTPIPLRTVRPFVMDEVVLTEAAEEEGFDINDQMEVTKFLKARVNEM
IAKANTLWDERNVQAVQDGLEELPRMLPLVRLKVDTTAVSSMSNPIRFGQEFQGKIANPR
DVLTFHRAKQTAARRVNADEPISLEDDENAEGGEKLVAGRVRMRTLVQDYLKAQELQLLG
ESGMANAIQVFVEKDDIHAIQTCVVILPLSSGVFLFAPMLTMPIRHVNATMKGLMKGVQA
KGEIDEDDLDDVVSKLYFSRFENNDAQSLRGSNQLEKVREQHEKDFAREQLQGSLAKVRS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactcggaattcttacctccacagcccaccatccggaacagcttcctcgatgac
acaattcgtatcatgcttgcgactgacaatcatatcggatacctcgaacgtgatcccata
cgcgggcaagattctatcaatactttcaaggagattttgcaactcgcagtcaaaaatgat
gtagacttcattctgcttgctggagacctcttccacgaaaaccgcccttcacgcgactgc
ctctaccaggtgatggctctcttgcgagaatacacgctcggtgacaagcctgtcgagatt
gagctgatgagcgaccctgacgagggtaaggcagctggattctcgttcccagcaatcaat
tatgaagatggcaacttcaatgttggaatccctgttttctctattcatggaaatcacgat
gatccacagggtgctgggcctgaaggcgcactctgcgccctcgacatgctctccgtatcg
ggactcgtaaactatatcggcaaacttgaccttccgttaaacgatgcgccgacagaaggc
attgctgtacgaccagtgctgctgcgaaaagggaatacgcacctgggcatgtacggcatc
ggcaatgtcaaagacgcgcgcatgcacttcgagttgcgaagcaatcgcgtgcgaatgtac
atgcctcgcgacaaagagaactggttcaaccttatgctgcttcaccagaatcgtgtgagg
catggtcctcaggaatctgtacctgaaggtatgttcgatgataatatcgatctggttatt
tggggccacgaacacgactgccgtatcgtgcctgaacccgtcgccggcaagcggtattac
atctcgcagccaggctcgtctgtagctacatcgcttgcagagggcgagtctctggaaaaa
catgttgctcttgtaaagattcaaggcaaggagtttgaattaacgccgatccccttgcgg
accgtacgcccgttcgtgatggacgaggtcgttctgacagaggccgctgaagaggaaggc
tttgacatcaatgaccagatggaagttaccaagttcctcaaagcacgggtaaacgagatg
attgccaaagcgaacactctatgggatgagcgaaatgtacaagcagtccaagatggatta
gaagagctgcctcgtatgcttccgctcgtccgcctcaaggtcgacactaccgctgtatca
tcaatgtctaaccccattcggtttggtcaagagttccagggtaaaattgcgaacccacgc
gacgtactcacctttcaccgcgcaaaacagaccgctgcgcgacgtgtcaacgctgatgaa
ccaatatcgctcgaagatgatgagaacgcagaaggcggagaaaagttggtggctgggcgc
gtgcgcatgcggaccttggtgcaggattacttgaaggcccaggaattgcaattgcttgga
gaaagtggtatggcaaatgcaattcaggtatttgtcgagaaagacgatatccatgccatc
caaacgtgcgtagtaatacttcctctgtcatcgggcgtttttttgtttgcgccgatgttg
accatgcccattaggcatgtaaacgcaacgatgaaggggcttatgaaaggcgtccaggct
aagggagagattgatgaagatgatctcgatgatgtggtaagcaagctgtatttctcgaga
ttcgaaaacaatgacgctcaatccttgcgcgggtcgaatcagcttgagaaagtacgagag
cagcatgagaaagacttcgctcgagagcagctgcaaggcagtttggctaaggtaaggtca
tga
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