Heterobasidion irregulare: HETIRDRAFT_34038
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Entry
HETIRDRAFT_34038 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K03267
peptide chain release factor subunit 3
Organism
hir
Heterobasidion irregulare
Pathway
hir03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HETIRDRAFT_34038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_34038
03012 Translation factors [BR:
hir03012
]
HETIRDRAFT_34038
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
HETIRDRAFT_34038
Translation factors [BR:
hir03012
]
Eukaryotic type
Release factors
HETIRDRAFT_34038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
20671767
NCBI-ProteinID:
XP_009543159
JGI:
Hetan2_34038
UniProt:
W4KEX5
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MGGNILYLSGTVDKRTMEKYEKEAKDAGRETWYLSWALDSTPQERLKGKTVEVGRAYFET
DTRRYTILDAPGHKTYVPSMITGAAQADVAILVISARKGEFETGFERGGQTREHIMLVKT
AGVGKIIVVINKMDDPTVGWEKSRFDEIKDKLTPFVRGAGYNPKTDVTWMPVSAYTGANL
KDRVASSVCAWWDGPSLLEHLDKMPMVDRHLHAPLMMPISEKYKDLGTIVVGKIESGHIR
KGDTLLLMPNRDTVEVATLYNELEEEVPAAASGDNVRLRLRGVEDEDISPGFVLTSPAKP
VRAVRQFEAQLAILEHKNIICAGYTAVMHVHTLAEEVALAGLLHYFDKATGRKSKKPPQF
AKRGQRIVALIETAAPVCIERFADYPQLGRFTLRDEGRTIAIGKVTKLIESGVDTDEVVG
GVANLSVASSAAPVA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggggggtaatattctttacctctctggcaccgttgacaagcgtaccatggaaaaatac
gaaaaagaggccaaggatgctggccgtgagacttggtatctttcatgggccctcgactcg
acaccacaagagcgtcttaaaggaaagactgttgaggtcggacgcgcttattttgagacc
gacacccgtcgctacaccatccttgacgcgcctggccataaaacatatgttccctctatg
atcactggtgcggctcaagctgatgtcgccatcctcgtcatctccgcccgcaaaggagaa
tttgagactgggtttgagcgcgggggtcagacgcgcgagcacatcatgctggtcaagact
gctggcgtcggaaagatcatcgtcgtgatcaacaagatggatgatcccactgtggggtgg
gaaaagtcgcgctttgacgagatcaaggacaagctgacgccgttcgtacgtggagcgggc
tataatcccaagacggacgtgacctggatgcccgtgtcggcatacacgggagcgaacctg
aaggaccgcgttgcgtcgtctgtctgcgcgtggtgggatggtccctcactacttgagcac
ctcgataagatgcccatggtcgaccgacaccttcatgcacctctcatgatgcccatatcc
gaaaagtacaaagaccttggtacaattgtcgtgggcaagatcgagtcagggcacatccgc
aagggcgacacgctcctgctcatgccgaatcgcgacaccgtcgaggtcgcgacgctgtac
aatgagctcgaggaggaggttcctgcggcggcgtcgggcgacaacgtgcggctgcggcta
cggggcgtcgaggacgaggacatcagcccggggttcgtgcttacaagcccggcgaagccg
gtgcgggcggtgcggcagttcgaggcacagctggcgatcttggagcacaaaaatatcatc
tgtgcggggtatacggctgtcatgcacgtgcatacgctcgcagaagaggtcgcacttgcg
gggctcttgcattacttcgataaggcgaccgggcgcaagtctaagaagcctccacagttt
gctaagcggggacagcgtatcgtcgcgttgattgagacggctgcaccggtctgtatcgag
cgcttcgcggattacccgcaactcggccgatttactttgcgtgacgagggaagaacaata
gcgatcgggaaggtcacgaagttgatcgagtccggcgtcgacacggatgaagtcgtaggc
ggcgtcgctaacctctctgtagcgagctctgccgcccctgtggcttga
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