Heterobasidion irregulare: HETIRDRAFT_36188
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Entry
HETIRDRAFT_36188 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
hir
Heterobasidion irregulare
Pathway
hir03022
Basal transcription factors
hir03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HETIRDRAFT_36188
09124 Replication and repair
03420 Nucleotide excision repair
HETIRDRAFT_36188
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hir01001
]
HETIRDRAFT_36188
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hir03021
]
HETIRDRAFT_36188
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_36188
03400 DNA repair and recombination proteins [BR:
hir03400
]
HETIRDRAFT_36188
Enzymes [BR:
hir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
HETIRDRAFT_36188
2.7.11.23 [RNA-polymerase]-subunit kinase
HETIRDRAFT_36188
Protein kinases [BR:
hir01001
]
Serine/threonine kinases: CMGC group
CDK family
HETIRDRAFT_36188
Transcription machinery [BR:
hir03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HETIRDRAFT_36188
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
HETIRDRAFT_36188
DNA repair and recombination proteins [BR:
hir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HETIRDRAFT_36188
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
APH
Motif
Other DBs
NCBI-GeneID:
20671816
NCBI-ProteinID:
XP_009548747
JGI:
Hetan2_36188
UniProt:
W4K003
LinkDB
All DBs
Position
Unknown
AA seq
365 aa
AA seq
DB search
MDAVEKANLARQKRWTKDQKVGEGTYAVVYRGREAATGRKVAIKKIKVGQLKDGLDMSAV
REVKYLRELHHQNVIELLDVFSSKANLNLVLEFLDTDLEMIIKNRSLVFLPADIKSWMAM
TFRGLEFCHRNFVLHRDLKPNNLLIASDGQLKIADFGLARDFADPGYKMTCQVITRWYRP
PELLFGCRYYSTAVDIWSVGCIFAELMLRTPYLPGESDMDQLKTIFRALGTPTEEDWPGH
TKLPDYVPVGQFPRAPLRELFTAASADTLNLLSKCLIYEPRKRISAKDALSHPYFFALPY
PSHPSKLPRSVPFGSQKALEEVDGNVDFTGDGPKVKAAAPGRLKRKLSKDDIGRNIARKL
DFSQS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggacgctgtagagaaggcgaacctagcacggcagaagcgatggacgaaagaccagaaa
gttggtgagggaacatacgctgttgtttaccgaggccgcgaagctgctaccggtcgcaaa
gtggctataaagaagatcaaagtcgggcagcttaaggatgggcttgacatgtccgccgtt
cgtgaagtaaagtatctgcgagagttgcatcaccaaaatgtcattgagctcctcgatgtg
ttctcttcgaaagccaacctaaatctcgtccttgagtttcttgacaccgacctcgagatg
ataatcaaaaatcgctctcttgttttcctgccagctgatattaagagctggatggctatg
accttccggggccttgaattttgtcatcgtaattttgtcttgcatcgtgacttgaagcca
aataacttgcttattgcctccgacggacaactcaagatagccgattttggtcttgcgcga
gacttcgccgatccagggtataaaatgacctgccaggtcatcacacgatggtaccgtcca
ccagaactgctctttggctgtcgttactacagtacagctgttgatatctggtctgtcggg
tgcatttttgctgagttgatgctccggacaccatacctccccggcgaaagcgacatggac
cagctgaagactatcttccgcgccctcgggacacccacagaagaagactggcctggccat
accaaactgccagactacgtccccgttggccagtttcctcgcgcgccccttcgcgaactc
ttcaccgctgcgagtgccgacacactcaacctcctcagcaaatgtctcatctacgagccg
cgcaagcggatcagcgccaaagacgccctgagccatccctatttctttgccctcccctac
ccctcacacccttccaagctcccaaggtctgttcccttcggctcgcaaaaagccctcgag
gaagtcgacggcaacgtcgatttcacgggcgatgggcccaaggtcaaagctgcagcccca
ggaaggctcaagcggaaactcagtaaggacgatattggccgaaacattgcacgcaagctg
gacttttcacagtcgtga
DBGET
integrated database retrieval system
