Heterobasidion irregulare: HETIRDRAFT_37184
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Entry
HETIRDRAFT_37184 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hir03016
]
HETIRDRAFT_37184
Transfer RNA biogenesis [BR:
hir03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
HETIRDRAFT_37184
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ThiF
Sacchrp_dh_NADP
NAD_binding_7
AlaDh_PNT_C
DAO
3HCDH_N
ApbA
Motif
Other DBs
NCBI-GeneID:
20671843
NCBI-ProteinID:
XP_009550465
JGI:
Hetan2_37184
UniProt:
W4JWH3
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MSKIRKGSVVVVGCGGVGSWAAVMLVRSGVSKIRLIDFDYVTLSSLNRHSTATLADVGTP
KVHCVGHALRQMAKFVDVDARVELWRAQDGAALLEGADWVIDAIDNIGTKVELLKYCVEH
NIKVFSSMGASTKSDPTRIQIADISDTIYDPLARTVRQRLRAAGIREGVPVVYSTEVPGD
VGLLPLPEEQFAKGKVGELATMDDFRVRILPVLGPLPAIFGLNAATYIICELAGKPLERP
MPVKHRKKLYDRLWKDLLAREGRIAGRQINNLPFSISDIGVVFEDIALARSIVPPHATCA
RATLARWDPLRPLSMENVVVFEGKEAERHMREVFGVSPDEKVSFEDGETLEEVAGELEMV
DALGGKLTKERTIKRPEEFWGEKVTAVVKARIDEAIRYRKWVV
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaatcaggaagggttctgtcgttgtcgtcggatgcggaggtgtgggaagttgg
gcggctgtaatgctcgtccggtcaggtgtctccaaaatccgccttattgatttcgactat
gtcaccctttcctcacttaaccgccattcgaccgccacgcttgcagatgtcggtacgccg
aaagtgcattgcgtcgggcatgcgctgcggcagatggcgaaatttgtggatgtcgacgct
cgtgtcgagctgtggcgtgcgcaggatggcgcagcgctgcttgaaggggcggattgggtc
attgatgcgatcgataatatcggcaccaaagttgaattgttgaagtattgcgtagagcat
aatatcaaggtcttttcgtccatgggtgcaagcacaaaatccgatcctacgcgaattcaa
attgccgatatttcagacacaatatatgacccccttgcgcggaccgtgcgccaacgccta
cgagcagcagggatccgtgagggagtccctgtcgtatactctacagaggttcctggcgac
gtgggtcttctgccgctccctgaggagcaatttgcgaagggtaaggttggggagcttgcg
acaatggacgacttcagggtgcggatcctgcctgtccttgggccactgccagcgatattc
ggattgaacgcggctacgtatataatctgtgagctagctggaaaaccgcttgagaggccg
atgcctgtgaaacaccggaaaaagctttacgaccggctgtggaaagacctgctggctcgt
gaagggcggattgcgggtcgacagatcaataacctgccattctcaatatcggacatcgga
gttgtatttgaggacattgcactagcgcgcagcatcgttccaccacatgcgacctgcgcc
agggcaacgctcgcacgatgggaccccctacgtcctctctccatggaaaatgtggtcgtt
ttcgaaggcaaggaagcagagaggcatatgcgagaggtatttggtgtctctcctgacgag
aaggtttcatttgaggatggagagacgctagaggaagttgcgggggaattggagatggta
gatgcactaggaggcaagctgacgaaagaaaggactatcaagaggcccgaagagttttgg
ggcgagaaagtcaccgcagttgtaaaagcgcggatagacgaggcgataaggtataggaaa
tgggtggtatag
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