Heterobasidion irregulare: HETIRDRAFT_377477
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Entry
HETIRDRAFT_377477 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hir04121
]
HETIRDRAFT_377477
Ubiquitin system [BR:
hir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
HETIRDRAFT_377477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box-like
LRR_At5g56370
DUF1180
F-box
Motif
Other DBs
NCBI-GeneID:
20671878
NCBI-ProteinID:
XP_009540833
JGI:
Hetan2_377477
UniProt:
W4KM26
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MSPDHAEHNAAAPEGTPVPATPPTRALSTSDPSGSLPLSPNKGKGVLASVDDTATYVDGG
PDVAPSSPDLETSSFERVSDSSSPLIHSISCLSESRPMHDTVSDASDNDSQIRYDDLEPA
ITLVGKGKGKDLPPTLPPLSFSPTEFYYDDSFSSPTLTSADAGPSSFGSVYTAVTGHDPT
PAGVVLDDPSLSRAESIPVHIRIPSRCHSISDLSTHTTHSLPTQSMSQHKFRVGASKSPT
ALARKLFAKGGDQSDSPSSPGSPITVEGVIDLDLDSATCGAGSCFGPWKLDSKSRAKDTS
ASFGKGRSYSNPFPLSTAFEPIPPITTPVYTPAPIVLPRKHFDELLPHELQLHILVCLVD
LHEEEQGRRERDGKWTVLKASSSKNKWVGREQGVRELVRLSRVCKSWTALVFDGQLWTRL
DLRSFPKMPASQILHIAASAGPFIRKLDLAGHTNLHHSTLLSLTDRLSIHPSVPGTVSPC
TLLTSINLSGCFALTTGSLHYLLERCPNLTSLSMKGLDAVTNETCERIYRHCPKLDILNM
NRCRNLSGAGVYTMASLALKHRAPLCLKEMRLSGLKGITDSVLDALGKATPYLVVLDLSY
CRDLHNSSVEAFVSCSDDFGQTETVLLTAREAGHTDHRRYRRRVTRLRHLSFSSCIMLTD
IACAHLAHALPHLELLELGGIGQHLTDEGLILLLQTLPDLRKLDLEDAREITDAVLQAIT
PRPVSQDPGRGRQSAASDPGHALEHLSVSGAANLTNEALSTLIQRCPQLRVLEADGTRVS
GAVVKEFTAVVRRREEQDAVIVAIDCRSVGEDVVKELAVSTRPRLGRRTYESRKLGYLDG
RDEEALGVGQDECDPRRVVLKTYYSWQTVDAVTAARQKRKRGRRDGGGSGGGSAVEELQL
GRARWWSPGGRRLSGMSSPSLMDANNE
NT seq
2783 nt
NT seq
+upstream
nt +downstream
nt
cgatgtcccccgaccacgcagagcacaatgccgcggctcctgagggcactccagtcccag
ctacaccgccaactcgtgccctcagcacaagcgacccatcgggttctctcccactgtcgc
cgaacaaaggcaaaggcgtgctcgcatccgtcgacgacacggctacgtacgttgatgggg
gtccagatgtagctccctcgtctccggacttggaaacatcttcattcgaaagggtgtctg
attcttcatcacccctgattcattccatttcttgtctctcagagagccgcccaatgcacg
atactgtctcggacgcttctgacaatgactcgcagattagatatgatgatctcgagcctg
ccatcactttagtcggcaaaggcaaaggcaaagatctcccacccactcttccgcctttgt
ctttttcgcccacagaattttactacgacgattcgttttcttctcctactcttacgtctg
ctgacgcaggtccttcatctttcggttcggtctatactgctgtgacgggtcatgatccta
ccccggccggagttgttcttgacgatccttccctgagccgagccgaatccattcctgttc
acatccgaataccttccagatgtcactctatctctgacctttctactcacactacccatt
ccctacccacacagtctatgtcgcaacacaagtttcgcgtcggagcttccaagagtccaa
cagccttggcccgaaaattattcgccaagggcggggatcagtcggattcaccgtcctccc
ctggcagtcctattaccgtcgaaggagtaattgacctcgatttagattctgcaacgtgtg
gtgcaggcagctgcttcgggccatggaaattggattcgaagtcgcgcgcgaaagacactt
ccgcctcatttggcaaaggtcgatcctactcaaaccctttcccgttgtctacagcgtttg
agcctatccctccgattacgacgccggtttatacacctgctccgattgtgctgccgcgca
agcacttcgatgagcttttaccccacgagctccagcttcacattcttgtgtgcctcgtgg
atctacacgaggaagagcagggacgacgtgaacgcgatgggaagtggacggtcctcaaag
cgtcttcgtcgaagaacaagtgggtcgggcgtgaacagggtgtacgtgagctcgtcaggc
tgagccgggtgtgcaagtcatggacagccctggtctttgacggccaactttggacgcgcc
tcgacctgcgatcatttccgaagatgcctgcatcgcaaattctgcatatagcggcatccg
caggtcctttcatccggaagctagaccttgcagggcacacgaatttacatcattcgaccc
tgctcagcctcaccgacaggctctcgatacaccccagcgtccccggcaccgtttcgccgt
gcaccctgctcacctctatcaacttgtctgggtgtttcgcgcttaccacgggatctctac
attatcttctggaacgctgtccgaatttaacgagtctgtccatgaaaggtttagatgcgg
tgaccaacgagacttgcgagcgtatctacaggcactgtcccaaactcgacatccttaata
tgaatcgatgcagaaatctatccggtgctggtgtctacactatggcctccctcgctctca
aacacagagcacctctttgcttgaaggaaatgcggctgtcgggtttgaagggcataacag
acagtgtcttggatgctctaggcaaggccacaccttatcttgtggttctagatctcagtt
attgtagggatctccataactcgtctgtggaggccttcgtgtcttgctctgacgacttcg
gccaaacggagacggtgctgttgacggcgcgcgaagctggccataccgatcatcgtcgat
accgaagacgcgtcacgcgcctccgccatctctccttttcctcttgtattatgctcaccg
acatcgcgtgtgcacacctggcacatgcactgccgcacctagaacttttagagctcggag
gtatagggcagcatctgacagacgaggggctgattcttctgctgcagacgctgccagacc
tccggaaactcgatctggaggatgcgagggagatcacggacgccgttctgcaagccatca
ccccccggccggtctcccaggatcccgggcgcggacggcaatctgcggcctcggatcctg
gtcatgcgctggagcacttgtccgtgtcgggtgccgcgaatttgacgaacgaggcgctct
cgactctgatacagcgctgtccacagctgcgtgtgctggaggcggacgggacgcgcgtgt
ctggggcggtggtgaaggagttcaccgcggtcgtgcgcaggagagaggagcaggacgcgg
tgatcgtcgcgatcgattgccgttctgtgggcgaggacgtcgtaaaggagctcgcggtgt
ccacgcggccgcggctgggccggcggacgtatgagtcgcggaagcttggctatctggatg
ggcgcgacgaggaggcactcggagtggggcaggacgagtgcgatccgcggcgcgtcgtgc
tgaagacgtactattcttggcagacggtggacgccgtcaccgctgctcgtcagaagcgga
agcgagggaggcgagacgggggcgggtccggaggcgggagcgcggtggaggagttgcagc
taggccgtgcgcggtggtggtctcctggcgggagacggttatcgggaatgagttccccgt
ccctgatggacgcgaacaacgag
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