Heterobasidion irregulare: HETIRDRAFT_377546
Help
Entry
HETIRDRAFT_377546 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K11771
SWI/SNF chromatin-remodeling complex subunit SWI1
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hir03021
]
HETIRDRAFT_377546
03036 Chromosome and associated proteins [BR:
hir03036
]
HETIRDRAFT_377546
Transcription machinery [BR:
hir03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
HETIRDRAFT_377546
Chromosome and associated proteins [BR:
hir03036
]
Eukaryotic type
Chromatin remodeling factors
SWI/SNF complex
HETIRDRAFT_377546
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
BAF250_C
Motif
Other DBs
NCBI-GeneID:
20671886
NCBI-ProteinID:
XP_009540867
JGI:
Hetan2_377546
UniProt:
W4KMH4
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MAALHPRALPPQNTHPINIPAYRSKHRQFLASLAGIHAARNTPLPPALTGIPNPAFDPLL
SSWTLLDPSPTEPGSIRLAGRLVDLFKLWTTVHTAGGGAKFTQQGLWPSVLPVFDLPDTL
PPPNSSQSVAEFLGQVYMAVVLPFEDVYRRNSREQQQRALQAAAQGALNPQQQQPFPSPI
HPRVPSQPILPPVTSAQPSPQLSRQLSASAVPGTPQQSFTALPPVVDLNPGPPLLPYEAN
APFDPDLESRKRKIEPEDEQKRTRQKTSGAPAGVLPQPSPSTPARGQPQRRKIEYVPTVR
EIGWGGRDVPAIAEEHARASTRRILRDLNEWGSIEVDALAMSVRSRIATELSYALTTLTI
LSTMRGANGNGFSASICPDLVDELLDLVADVALGGVEAELADAEEGEDAAEKITTHKELV
NKVLEDGSRPFAALDRKQGAKPEELGHKQRPGDLVLAVMNILRNLSVFPENQEFLARHER
ALPYALRLCGLGRGLQPVSPALSLTDLVAVRRDTLYLLVNLAPHVRLASSLSATPSPTAA
RLAQRTFALVSSFLVDPFDAVTPLELLRQSDMVPGGPVHPPPALVDAALEVFTRLGQPDA
NRRVIARSVPLGWQRRLFEALVHRMPVAEPDFAVALRDHWLAYVAKVVMALYALAFLAPP
RLKAALRADRTLDAARVLLRLVRRFTVAVPDALRGHARGSALRATEALRALDEEEDAFDG
ARSTAGPVLAFGVGYGEVGEDRVETGTGLLGGFQDEVVFEIMMAKDMENDMFKELDSLAR
VG
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggccgccctccatccccgcgcactcccgccccagaacacacatcccatcaacatcccc
gcttaccgcagcaagcaccgccagttcctcgcctccctcgccggcatccacgccgcccgc
aacaccccgctcccccccgcgctcaccggcatccccaaccccgcgttcgatcccctgctc
tcctcctggaccctcctcgatccgtcccccacagaacccggctccatccgcctcgcaggc
aggctcgtcgacctcttcaagctctggacgaccgtccacaccgcaggcggaggcgcaaag
ttcacccagcagggcctctggccctccgtcctccccgtcttcgacctccccgacaccctc
ccgccccccaactcgtcgcagtccgtcgcagaattcctcggccaggtctacatggccgtc
gtcctccccttcgaggacgtctaccgcaggaactcccgcgagcagcagcagcgcgccctc
caggccgccgcccagggcgccctcaatccccagcagcaacagcccttcccgtcccccatc
cacccacgcgtcccctcccagcccatcctcccccccgtcacctctgcccagccgtcgccc
cagctctcccgtcagctctccgcctccgcggtccccgggacgccccaacagtccttcacc
gccctgccccccgtcgtcgacctcaaccccggcccgcccctgctcccctatgaagccaac
gcgccctttgatccagacctcgagtccagaaagcgcaagatcgagcccgaggacgaacaa
aagcggacgcgtcagaaaacatcgggcgcccccgccggcgtgctcccgcagccctcgccc
tcgacccccgcccgcggccagccgcagcgccgcaagatcgaatacgtcccgaccgtgcgc
gagatcggctggggcggccgcgacgtgcccgccatcgccgaggagcacgcccgcgcgagc
acccggcgcatcctccgcgacctcaacgagtggggcagcatcgaggtcgacgccctcgcc
atgagcgtccgctcccgcatcgccaccgagctcagctacgccctcaccaccctcaccatc
ctctccaccatgcgcggcgcgaacggcaacggcttctccgcgagcatctgcccggacctc
gtcgacgagctgctcgacctcgtcgcggacgtcgcgctcggcggcgtcgaggccgagctc
gccgacgccgaggagggcgaggacgccgcggagaagatcacgacgcacaaggagctcgtg
aacaaggtgctcgaggacggcagtcggccgttcgccgcgctcgaccggaaacagggcgcc
aagcccgaagagctcgggcacaagcagcgcccgggcgacctcgtgctcgccgtgatgaac
atcctgcgcaacctgtcggtctttccggagaaccaagagttcctcgcgcggcacgagcgc
gcgctaccctatgcgctgcggctgtgcgggctcgggcgcgggctgcagcccgtctcgccc
gcgctgtcgctgacggacctcgtcgcggtgcgccgcgacacgctgtacctgctcgtcaac
ctcgcgccacacgtgcgcctcgcgagctcgctctccgcgacgccgtcgcccacggccgcg
cggctcgcgcagcgcacgtttgcgctcgtgtcgtccttcctcgtggacccgttcgacgcg
gtcacgcccctggagctcctgcggcagtcggacatggtccccggcgggcccgtgcacccg
ccgccggcgctggtggacgcggcgctggaggtgttcacgcggctggggcagcccgacgcg
aaccggcgggtgatcgcgcgcagcgtcccgctcgggtggcagcggcggctgttcgaggcg
ctcgtgcaccggatgccggtggcggagccggactttgcggtcgcgctgcgggaccactgg
ctcgcgtacgtggcgaaggtggtgatggcgctgtacgcgctcgcgttcctcgcgccgccg
cggctcaaggcggcgctgcgggcggaccggacgctggacgcggcgcgggtgctgctgcgg
ctcgtgcggcggttcacggtcgcggtgccggacgcgctgcgcgggcacgcgcgggggtcg
gcgttgcgggcgacggaggcgctgcgggcgctggacgaggaggaggacgcgtttgacggg
gcgcggagcacggcggggccggtgcttgcgtttggggtcgggtacggggaggtgggggag
gaccgggtggagacggggacggggctgctgggcgggttccaggacgaggtggtgtttgag
atcatgatggcgaaggatatggagaacgacatgttcaaggagctggacagcctcgcgcgc
gtgggatag
DBGET
integrated database retrieval system
