Heterobasidion irregulare: HETIRDRAFT_378293
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Entry
HETIRDRAFT_378293 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hir03009
]
HETIRDRAFT_378293
04121 Ubiquitin system [BR:
hir04121
]
HETIRDRAFT_378293
Ribosome biogenesis [BR:
hir03009
]
Eukaryotic type
90S particles
Other 90S particles
HETIRDRAFT_378293
Ubiquitin system [BR:
hir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
HETIRDRAFT_378293
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gly_transf_sug
Caps_synth
Motif
Other DBs
NCBI-GeneID:
20671918
NCBI-ProteinID:
XP_009541284
JGI:
Hetan2_378293
UniProt:
W4KQQ5
LinkDB
All DBs
Position
Unknown
AA seq
763 aa
AA seq
DB search
MSVLFSPQPKTNGLREKSRSPNGLPVFSSAVQEKMHRHAKSSSWVAPMSLDIPGVRNRRL
RIWVLNPARLHQLSVSRFGRKRGPLILALACASFIFAMFALAKRFGTEEKQWPAPLFRED
PSTLVFGRDDLQKIWKWEVESGHYPSSHDIPKAVGLTVPPLNPALPPKKVAKIPSRFRPP
TAQVTNTIGHGPKRVYLDIQARPPNVAYPPRPVPGSAADLDIVMEHCDFSTGKYVRDCLE
VLRLGGGLDNENRLRRGKFDEWKYIYLEDGPVDKYIEPVATVKAGFDGLIQQPSAAVDPN
VGLTKKPRVEWDPPVQLPAPLQHRPYSTLPTTCDPESPRLFHMFWTGPFTDKPYIALMSF
LFTQNVRLHIHEEDPDATVCRPQFWLWINPGPAASMPNPNALHDMYEQLKTNPWASPFLH
PRFKGVISFKLWNTTEQLDGIPEIKNEWRVFKDTLFNSGGNIIPVPQKEGAQQEEAVLAP
VDEAAQADASPTKAPQAKGGDDDDMLNRLGSKSASSYDRLSVILSDMARFVLCHRFGGVY
LDADTIFLRDWEELWGWKGAFAYRWSRLEKYNTAVLRLNKGSALGTFLFRTALKNGLDFH
PMTVSRYTKDAYLEGLLLRLPDALFDSAWLNTEYYQRDRPPQPYITEFVELFETPAQTSA
APQALGFDGFYRGAYSYHFHNFWWKPFDPARNFPDLGPRFIEGERLARTAESAATASNAT
ETAKEDQVADDKRDLDWSTVLKRTFEAYIRGERPNMYGEWLAW
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttctcttttctccacagccaaagacgaacggcctgcgtgaaaaatcaaggtcg
cccaacggcctccccgtcttttcctccgccgtccaggaaaagatgcatcggcacgcaaag
tcctcttcctgggtggcccccatgtccctcgacatccccggcgtccgcaacaggcggttg
cgcatctgggtcctcaaccccgcccgcctccaccagctcagcgtgtcccgcttcggccgc
aagcgcggccccctcatcctcgccctcgcctgcgcctccttcatcttcgccatgttcgcg
ctcgcgaagcgcttcggcacagaggagaagcaatggcccgcgcctctcttccgcgaggac
ccctcgaccctcgtctttggcagggacgacctccagaagatatggaagtgggaggtcgag
agcgggcactatcccagcagccacgacattcccaaggccgtcggcctcaccgtcccgccg
ctgaaccccgccctgcccccgaaaaaggtcgcaaaaatcccctcgcggttcagaccgccg
actgcgcaggtcacgaacacgattggccacggccccaagcgcgtatatttggatatccag
gcaagaccccccaatgtcgcgtatcccccgaggccggttcccgggagtgcagcagacttg
gacatcgtgatggagcactgtgatttctctacaggaaagtatgttcgtgactgtctcgag
gtcctccggttgggtgggggtctcgataatgagaacaggttgaggcgcggaaagtttgac
gagtggaagtacatttatctagaagacggtccggtcgacaagtacatcgagccagtcgcg
accgtaaaggctggctttgacgggctcatccagcagccctccgctgcggtagatccaaac
gtgggtctgacgaagaagcccagagtagaatgggatcctcccgtgcagctccccgcaccc
ctgcagcaccgtccgtactctacgctgcccacgacctgcgacccggagagccctcgtttg
ttccacatgttctggacggggccgttcaccgacaagccatatatcgctttgatgtcgttc
ctgttcacgcagaacgtccggctgcatatacacgaggaagaccccgacgccacggtctgt
cgcccgcagttctggctgtggattaacccaggcccggctgcgtcgatgcccaacccgaac
gcactccacgacatgtacgagcagctcaagacgaacccgtgggcgtcaccgttcttgcac
ccgcgcttcaagggcgtgatctcgttcaagctctggaacacgaccgagcagctcgacggc
atcccggaaatcaagaatgaatggcgcgtcttcaaggacaccttgttcaactctggcggc
aacatcatccccgtgccgcagaaagagggcgcgcagcaggaagaggccgtcctggcgccc
gtcgacgaggccgctcaggccgacgcctcgccgacgaaggcgccccaggcgaagggcggc
gatgacgacgacatgctcaaccgcctcgggtccaagtcggcgtcttcgtacgatcggctg
tccgtcatcttgtcggatatggcgcgattcgtgctctgtcaccgcttcggcggcgtctac
ctcgacgcggacacgatcttcctgcgcgactgggaggaactctggggatggaagggcgcg
ttcgcgtaccgctggtcgcgtctagagaaatacaacaccgcggtgctccgcctcaacaag
ggctctgcgctcggcacgttcttgttccgcacggctctcaagaacgggctcgattttcac
cccatgacggtctcgcgatacacgaaggacgcgtatctcgaaggcctgctcttgcgtctc
ccggatgctctgtttgattcggcgtggttgaacaccgagtactaccagcgggatcgtcca
ccacaaccctatatcaccgaatttgtggaactcttcgagactccggcacagactagcgcg
gcaccacaagctcttggattcgatggcttctaccggggcgcgtactcgtaccacttccac
aatttctggtggaagccgtttgatcctgcgcgcaacttccccgacttgggcccacgcttt
atcgagggtgagcgcctcgcgcgcacggcggagagcgctgcgacggcgtccaacgcgacg
gagacggcgaaggaggaccaggtggcagacgacaagcgcgacctggactggtcgacggtg
ctcaagcgcacgttcgaggcgtacattcgtggggagcggccgaacatgtacggcgagtgg
ctcgcgtggtga
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integrated database retrieval system
