KEGG   Heterobasidion irregulare: HETIRDRAFT_378861
Entry
HETIRDRAFT_378861 CDS       T03455                                 
Name
(RefSeq) hypothetical protein
  KO
K11097  small nuclear ribonucleoprotein E
Organism
hir  Heterobasidion irregulare
Pathway
hir03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    HETIRDRAFT_378861
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hir03019]
    HETIRDRAFT_378861
   03041 Spliceosome [BR:hir03041]
    HETIRDRAFT_378861
   03032 DNA replication proteins [BR:hir03032]
    HETIRDRAFT_378861
Messenger RNA biogenesis [BR:hir03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     HETIRDRAFT_378861
Spliceosome [BR:hir03041]
 Complex A
  U1 snRNP components
   Sm proteins
    HETIRDRAFT_378861
  U2 snRNP components
    HETIRDRAFT_378861
 Complex B
  U1 snRNP components
    HETIRDRAFT_378861
  U4/U6.U5 tri-snRNP components
    HETIRDRAFT_378861
 Complex C
  U2 snRNP components
    HETIRDRAFT_378861
DNA replication proteins [BR:hir03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     HETIRDRAFT_378861
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 20671938
NCBI-ProteinID: XP_009541569
JGI: Hetan2_378861
UniProt: W4KQM2
LinkDB
Position
Unknown
AA seq 87 aa
MSGRQQRVMVQPINVIFKNLQQRAKVVVWLYDNIEMRIEGRIIGFDEFMNIVIDEAAEVF
VKEAKPRRELGRIMLKGDNITLIQQVV
NT seq 264 nt   +upstreamnt  +downstreamnt
atgtcgggacgtcaacaacgtgtgatggtacaacccatcaatgtaatcttcaaaaacttg
caacaaagggctaaagtcgttgtctggctgtacgacaatatcgagatgcgtatagaaggc
agaatcattggttttgatgaattcatgaacatcgtcatagatgaggctgccgaggtgttt
gtcaaagaagctaaaccaaggcgggagctaggacgcatcatgttgaaaggagacaatatc
acgctaattcagcaagttgtatag

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