Heterobasidion irregulare: HETIRDRAFT_379314
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Entry
HETIRDRAFT_379314 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K03265
peptide chain release factor subunit 1
Organism
hir
Heterobasidion irregulare
Pathway
hir03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HETIRDRAFT_379314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_379314
03012 Translation factors [BR:
hir03012
]
HETIRDRAFT_379314
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
HETIRDRAFT_379314
Translation factors [BR:
hir03012
]
Eukaryotic type
Release factors
HETIRDRAFT_379314
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
20671964
NCBI-ProteinID:
XP_009542249
JGI:
Hetan2_379314
UniProt:
W4KJ95
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MSQDQAEQNIQMWKVKKLIKSLDAARGAGTSMISLIIPPKDQISRASAMLTQEYGTASNI
KSRVNRLSVLAAITSTQQRLKLYNRVPPNGLVLFVGTILTDEGKEKKVSFDFEPHKPINT
SLYLCDNKFHTEALSELLESDSRFGFIVMDGNGTLFGTLAGNTREVIHKFTVDLPKKHGR
GGQSALRFSRLRDEKRHNYIRKVAELAVQHYITNDKVNVTGLVLAGSADFKTELGQSDMF
DLRLAAKIIKVVDVSYGGENGFNQAIELAAESLANVKFVQEKKLIQRYFDEISQDSGKYC
FGIDDTLKALELGAVETLIVWENLDITRYVLRNAANEENIVHAKKEQEKDREKFLDKSTG
LEMEQAIEPQPLLEWFAEKYKEFGANLEFVTDRSQEGAQFVKGFGGIGGLLRYKVDFTNL
TSIDEEEDEFYSDDEDI
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagatcaagctgagcagaatatccagatgtggaaggtcaagaagctcatcaag
agccttgacgcggccagaggcgctggcacttccatgatcagtctgattatacccccgaag
gatcaaatctcgcgtgcatccgctatgttaacacaggaatatggaacagcgtctaacatc
aaatcgcgagtcaatcgactgtctgtcctagccgcaatcactagtacacagcaacgtttg
aagctgtacaaccgagttccaccaaatggtcttgtcctattcgtcggtaccattttaacg
gatgagggaaaggagaagaaggtgtcttttgatttcgagcctcataagcccatcaacaca
tctttatacctctgcgacaataagttccacacggaagctctctctgaacttctagagtca
gattctcgatttggatttatcgtcatggacggcaacggtacacttttcggcactctcgca
gggaacacccgcgaagtcattcataaattcactgtcgatctccccaaaaagcacggtcgt
ggtggacaatctgccctgcgtttctcgcgtctccgtgatgaaaaacgtcacaactacatt
cgtaaggtagctgaactcgccgtacagcattacatcaccaacgacaaggtcaacgtcacg
ggcctcgttttggctggtagtgccgattttaaaacggagctggggcagagcgacatgttc
gatctgcgtttagctgcaaagatcatcaaggtcgtcgatgtgagttacggcggcgaaaat
gggttcaatcaggctatcgagcttgccgcggagtctttggccaatgtcaagtttgttcag
gagaaaaagcttatccaacggtactttgacgaaatcagtcaagattcaggcaaatattgc
ttcggtatcgatgatacattgaaggctctggaactgggtgccgtggaaaccttgatcgtc
tgggagaaccttgatatcactcgttatgtccttcgcaacgctgccaatgaggagaatatt
gttcacgcaaagaaggaacaagaaaaggaccgtgaaaagttcttggataagtctactgga
ctcgagatggagcaggccattgaacctcaacctcttctggaatggtttgccgagaaatac
aaggaattcggcgcgaaccttgaattcgtcacagatcgctctcaagagggagcacagttc
gttaagggctttggtggaatcggaggtttgctgcgatacaaagtcgacttcaccaatttg
acgtcgatcgatgaggaggaagatgagttctactctgatgatgaggacatctga
DBGET
integrated database retrieval system
