Heterobasidion irregulare: HETIRDRAFT_379871
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Entry
HETIRDRAFT_379871 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hir03009
]
HETIRDRAFT_379871
Enzymes [BR:
hir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
HETIRDRAFT_379871
Ribosome biogenesis [BR:
hir03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
HETIRDRAFT_379871
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
TRM5-TYW2_MTfase
PCMT
Sigma70_ner
DUF938
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
20671994
NCBI-ProteinID:
XP_009542592
JGI:
Hetan2_379871
UniProt:
W4KKA6
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MEARSRALDVRAAKEAQLDAEELQLAEQIGAEDDDELDENDEDGASEAGGEENGAFVLPT
AAEREEEKRLGGPDVHVVQRRMRECVRILGKWKKLGEKTGRSRSEYIDQLLSDIGSYYGY
NDFLAEKLFQLFPVAEAIEFFEANEVPRPVTIRTNTLRTRRRDLAQALVNRGVNLEPIGK
WTNVGLQVFESNVPIGATPEYLAGHYMLQAASSFLPVIALSPQPHERVLDMASAPGGKTT
HIAALLQNTGVVFANDANKARTKSLTANVHRLGAKNVVVCSYDGREFPKVMGGFDRVLLD
APCSGTGVISKDSSVKVNKSERDFTLLSHLQKQLILCAIDSINPVSKTGGYLVYSTCSVT
VDENEAVVEYALRKRPNVHLVDTGLEFGREGYTRYRGKQFDESIKLTRRFYPHVHNMDGF
FVAKFKVERKVKGKKDGEDVKSTREVKMDVDVQGKDVHFDVEEDRPYLEEAKRRRMKAKG
LRVPPRNRPVASAIVQATA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggaagctcgttcacgagcactggatgtccgagccgcgaaagaggcccagcttgatgca
gaggagttgcagcttgcagagcagatcggcgccgaagatgatgacgagttagacgaaaat
gatgaagatggtgcaagcgaagcggggggtgaagaaaatggcgcatttgttttgcccaca
gccgcggaaagggaggaggagaaaaggttaggcgggcctgatgttcatgttgtacagaga
cgcatgcgagagtgcgtcaggatattgggcaaatggaagaaacttggagagaagacagga
cgatctcgctctgagtatatcgaccaacttttgtcggatattgggagctactacgggtac
aacgatttcttggcagaaaaattgtttcagttgttcccagtcgccgaggcaatcgagttc
tttgaggcaaacgaggtgcctcgtcctgtgaccatccgcacgaacactcttcgcacgaga
cgaagagacctagcgcaggcactcgtcaaccgaggagtgaacctcgaacccataggcaaa
tggacgaatgttggcttgcaagtttttgagagcaatgtgccaataggtgcaacaccagaa
tatcttgcgggtcattatatgcttcaagcggcgtcctcttttctacctgtgatcgcgctt
tcgcctcaaccgcatgagcgcgtgcttgacatggcctctgcgcccggaggcaaaactacc
cacatcgctgctcttctgcagaacaccggcgtcgtattcgctaatgacgccaacaaggcg
cggacaaagagtctgactgcgaacgtgcaccgtctgggggctaagaacgtcgtagtgtgt
tcgtatgatgggagagaattcccaaaggtaatggggggatttgatcgtgtccttctcgat
gccccttgcagcgggaccggcgtcatcagcaaggactccagtgtcaaagtcaacaagtcc
gaacgcgatttcacacttctttcccacctccaaaaacaactaattctttgtgcaatcgac
agcatcaatcctgtatccaaaacaggcggttatctcgtctactccacgtgttccgtgact
gtggacgagaacgaagccgttgtcgaatacgctctccgcaaacgccccaatgttcatcta
gttgacactggtctcgagtttggtcgcgagggatatacccgataccggggcaaacaattc
gacgagagcatcaagctgacaaggcggttttacccgcacgtacacaacatggatggcttt
tttgttgctaagttcaaggtggagaggaaagtgaaggggaagaaggacggcgaagatgtg
aagagtacgagagaagtcaagatggatgtcgatgtgcaaggcaaggatgttcacttcgat
gttgaagaggacaggccttatctcgaagaggccaagcggagacgtatgaaagccaaaggc
ttgcgtgttcctcctcggaaccgtccagtcgcttctgctattgtccaagccacagcgtga
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integrated database retrieval system
