Heterobasidion irregulare: HETIRDRAFT_380013
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Entry
HETIRDRAFT_380013 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K24755
WD repeat-containing protein 76
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hir04121
]
HETIRDRAFT_380013
03036 Chromosome and associated proteins [BR:
hir03036
]
HETIRDRAFT_380013
03400 DNA repair and recombination proteins [BR:
hir03400
]
HETIRDRAFT_380013
Ubiquitin system [BR:
hir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
HETIRDRAFT_380013
Chromosome and associated proteins [BR:
hir03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
HETIRDRAFT_380013
DNA repair and recombination proteins [BR:
hir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
HETIRDRAFT_380013
DSBR (double strand breaks repair)
Other DSBR factors
Others
HETIRDRAFT_380013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
20671998
NCBI-ProteinID:
XP_009542678
JGI:
Hetan2_380013
UniProt:
W4KJ47
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MPRHHDLTLEELADKAEWEHGVFTGLTAEFEALVRTPHARRAAAQDAFVYDADDKAEARE
VAALQKRVGSLKVAARAKVTQDRVYSAAYHPDRSKDLIFFGDKHGQLGIWDARAPTEDEG
DDDDDEPEGTPATRRAAKSEGKVWQLQAHWPATSKSSISSIKFDPIDSHSVFTTAYDCTI
RSLSLATGVSREVFSSGEVLITSIDLPPAGHELWASDASGGVTHLDLRQDKSKARWYELS
DQKIGSVSINPVNPHLLLTASNNRTLKVWDTRALAGLPVTDNGALDFDSDVIEGLLTSKA
GKCTLRSNWPHGKSVSSAYWDPRGRTIVSTSYDDTLRLWDIKPSMQAKDAGFPVVQPFSK
IKHDCQTGRWVTVFRAQWSPNPDVLPHFTVGNLDHSLEIYSCKGDALAKLSDRSLISATQ
AVTCSHPSIVERAASGNGSGRCILWAPPDEDASS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgccacggcaccacgacctcacgcttgaggaactcgcggacaaggcagagtgggagcac
ggcgtgtttacggggctcaccgcagaattcgaggcgctcgtgcgcacgccgcacgcgcgg
cgcgcggcggcccaggacgcgtttgtgtacgacgcggacgacaaggcggaggcgcgcgaa
gtcgcggcgctgcagaagcgcgtgggcagcttgaaggtcgcggcgcgcgccaaggtgacg
caggacagagtgtacagcgcggcgtaccaccctgacaggtcgaaggatcttatcttcttt
ggagataaacacggacagttggggatatgggacgcgcgcgcacctacagaggacgaaggc
gacgatgacgacgacgaaccggaaggtacgcctgcgacgcgtcgagcggcgaagagcgag
ggcaaagtatggcaattgcaagcgcactggcctgcaacgtccaagtcttccatctcttca
atcaaatttgatccaattgactcgcacagcgtgttcaccaccgcatacgactgcacgatc
cgcagcctctccctcgcgacgggcgtgtcgcgcgaagtgttctcgtcgggcgaggtcctg
attacgagcattgacctgccgcccgcggggcacgagctgtgggcatctgacgcctcgggc
ggcgtcacgcacctcgatctgcgccaggataagtccaaggcgcgttggtacgagctttct
gaccagaagatcggctcggtcagtatcaaccctgtgaacccgcacctgctgctcacggcg
tcgaataaccggaccttgaaagtgtgggatacccgcgcgctggcaggcttacccgtcacg
gacaacggggcgcttgacttcgactcggacgtcatcgaggggctgctcacctccaaggcc
ggcaagtgcacgctccgctcgaactggccacacggtaaatccgtgagctctgcctattgg
gatccgcgggggcgaacgatcgtgagcactagctacgacgacacgctgcgattgtgggac
atcaaaccgtcgatgcaggcgaaggacgcgggattccccgtcgtccagccattcagcaag
attaagcatgattgccagacgggccgatgggtgacggtgttcagagcgcagtggtcgccc
aaccccgatgtccttcctcatttcaccgtcggtaacctggatcactctctggaaatatac
tcttgcaagggcgatgcgctcgccaagctctccgaccggtcattaatatctgcgacgcag
gctgtgacatgctcacatccgagcatcgtcgaacgtgcagccagcggaaacggcagcggt
cgatgcatattgtgggctccacctgacgaagacgcgtcgtcatga
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