Heterobasidion irregulare: HETIRDRAFT_380901
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Entry
HETIRDRAFT_380901 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hir03021
]
HETIRDRAFT_380901
Transcription machinery [BR:
hir03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
HETIRDRAFT_380901
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
20672042
NCBI-ProteinID:
XP_009543462
JGI:
Hetan2_380901
UniProt:
W4KF64
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MDPHSRHSQFNQRPPKTGPIALASRHMDFSLSKSSPSLDEFTRHPAPSRKSSSASSPSLL
ASRPIATNSRIKQDEKLRKDMYLAFVNNALQQKAMGICEPFDELVEQFNINKPDNDAPSP
VPQLRLWIQALMHVVSRLERSHSALVEAVVRIPWMTMETTFVTSYTSFIGILVSARPEYL
SLVLGEIAHGFTYQSGLQALHAGLPESSSFPLTRRVVYDRIHHLLQHLLSLIPTLPSTLQ
PLLVRKFPHKRQSQAAQVTYIRNMLRVTEYCPEIADRLLSTIVDRAVQIDVEIQIEIEEL
EAEDAAQEQPELFDLDPFDTVVGQEGDLDGSDIESDSGELSGDDFSDLSSEGGDLDNERA
EPSLIVSHIQDMVNKLDSILKLVFDHFDRTNTAAIAVSDPIPRADIARSDSPLSALDSNS
TPTLTAESSKTLRRNQFHTLLSIFDRTILRTFKSRYTQFLLFWYASLDPEFSDMFQGELV
SKALLDADQPVVTRAAAASYIASFVSRAQFVDQECTRSVMRLLCGFLRSQLDVYEAVASA
GLVHSAGMAPQNVFYAVAQAVFLIFCFRWRDLLEDQGEDVDEYSSVPGHGPDKKWMPELS
IVQRMATSLLNPLKHCSENVVLQFARISHATGLVYVYPIIEANKRLEFTPNMPTP
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggatcctcactccaggcattctcaattcaaccagaggcctccgaaaactggcccaatt
gctcttgcatcgaggcacatggatttttctctttcaaagtcgtcgccatcgctcgacgaa
ttcacaagacatcctgcaccctcgcgaaaatcttcttcggcttcctcaccatctctactc
gcctccaggccgatagccacaaattccaggatcaagcaggatgaaaagctgaggaaggat
atgtaccttgcatttgtgaataatgccctgcagcaaaaagccatgggcatctgcgagccg
tttgatgagctggttgagcaattcaatataaacaaacccgacaacgatgccccatctccc
gtgcctcagctgcggctttggatacaggctttgatgcacgtagtatcccgcctcgagcga
tcgcattctgctttggtcgaagctgttgtgcggataccctggatgacaatggaaaccact
ttcgtgacatcatacacgtcgtttattgggatattggtcagtgcacgaccagaatatctg
tcgttggtgttgggggagattgcacatggattcacataccaatccggtctacaagcgcta
catgctggcctgcccgagagctcttccttccccctcacgcgccgcgtggtttatgaccgc
atacatcatcttctgcagcatctcctttcactcatccccacgcttccttcgactcttcaa
ccgctcctagtccgcaagtttccccataagagacaaagccaggcagcgcaagtcacgtac
atccgcaatatgctccgagtcacggaatactgcccagaaatcgctgatagacttctttca
acgatcgtagaccgagctgtccaaatagatgttgagatccaaatcgaaatcgaggagctc
gaggccgaagacgctgcacaagagcaacccgagttgtttgatttagatccatttgacacc
gttgttggtcaggagggtgatcttgatggatccgacatcgagtctgattctggagagctg
agcggggatgatttctccgatctttcttctgaaggaggtgatcttgacaatgaacgcgcc
gagccatcattaatcgtcagccacatacaagatatggtcaacaagctggattctatccta
aagctagtatttgatcacttcgatcgcaccaataccgctgccatcgcagtatccgatcct
atacctagagctgacatcgcccgctccgactcgccgctatcggcgctcgacagcaactcc
acccccacactcactgcagagagcagcaaaacgctccggcgaaaccagttccacaccctc
ctctccatcttcgaccgcacgatcctgcgcacgttcaaatcgcggtacacgcagtttttg
ctcttctggtatgcttcgctcgatccagagttcagcgacatgttccagggcgagctcgtg
tcgaaggcgctgctcgatgcggaccagcccgtggtcacccgtgccgcggccgcgagctat
atcgcgagcttcgttagccgtgcgcaatttgtcgaccaggagtgcacgcggagcgtcatg
cgccttttgtgtggtttcttgcgcagccagttggacgtgtatgaagcggtcgcgagcgcg
gggctagtgcactcggctggtatggctccgcaaaatgtcttctatgctgtcgcgcaggcg
gtgttcctgattttctgtttccgatggcgggatctactcgaagaccagggtgaggatgtc
gacgaatacagctctgtaccaggccatggcccagacaagaagtggatgccagagctgtcc
atcgtgcagcggatggcgacgtccttgctcaatcccttgaagcactgctccgaaaacgtt
gtgctgcagttcgcccgcatctctcatgccacgggccttgtctacgtctatccgatcata
gaggcgaacaaacggctcgagttcactccgaatatgccaacgcca
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