Heterobasidion irregulare: HETIRDRAFT_381163
Help
Entry
HETIRDRAFT_381163 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hir03016
]
HETIRDRAFT_381163
Enzymes [BR:
hir01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HETIRDRAFT_381163
Transfer RNA biogenesis [BR:
hir03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HETIRDRAFT_381163
Prokaryotic type
HETIRDRAFT_381163
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-GeneID:
20672055
NCBI-ProteinID:
XP_009543627
JGI:
Hetan2_381163
UniProt:
W4KF10
LinkDB
All DBs
Position
Unknown
AA seq
896 aa
AA seq
DB search
MSASPRVREREIDHDETAAPSAKRQKFEQDVSSSSAPSEEAGEKRVEASSAPLEASDAAY
SAIPEEPESLLPPSHSLLGTKFLSQPSTDGHVRILETDVGISEYIAKDVPKIDGIIKQRF
TDFLVYEVDLDHNVIHIKSLDMPESPSKKDKDEAAPVTELSASGEAMQGIESTSTPADAK
IVEETPSVVPAEPAFETPQPSDAPEPVTPETPADPWPETFTTRLATFLSEEKVALLKQMF
LEGPEPPFVSDAGWGGRSTTNEVSPSVAETVEEKAKDESEEVVEKEVKGRGKRGRERGGR
GARGGRGGRGGRPGRLGAREDHRKVLSDPIVAKSTRTELHQAVRELFGGKLDSETDTTAP
ADDEGSRIVIKWSRRGGGRGGGRGGGRGDKGSNSDRPSRGNFPPYIHFTLQKTNRDTQDA
LAYLARTLHVNVKDLSTAGTKDKRGVTVQRVALRRGGKAVEDIWRLANGVPGRHSVEEAV
RERGERGVRIADLNYRKAGLELGMLKGNAFVITLRNVQVDSTETLNRAMNSIKDHGFINY
YGMQRFGTASIPTHSIGLALLKEDWHRAVSLILRTRPGEHPDVVAARQAWLVDGDLDRAL
ELMPRRVVAERCILESYRKQNGETRNALGALSTIPRNLRLMYVHAYQSYVWNAIVSERIR
TYGAEKAVVGDLVLVSTKATDGDMEVDEVEVETATDNGPSRGSRREKKPWQPAQVKTLTA
EDVDRYSIFDVVMPLPGKDVAFPGGSLGERYKEFLRKDGLDPDNFNRRQKDYSLSGSYRN
IMHLPRELSWDVLRYTDPDVPLAQSDEDKLLGYDAPAIVPDGRFLALQIRLTLGTAAYAT
MALREVTKTETSSHFQSSLTQASQDQQFKSAGEATAADVDPSADTDAVVVEELGGE
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcctctcctcgcgtgcgtgaacgcgaaatcgaccacgacgaaacagcagctccc
tctgcgaaaagacaaaaattcgagcaagatgtgtcaagctcttctgccccatcagaagaa
gctggtgaaaaacgcgtagaagcttcatctgcaccactcgaagcaagcgatgcggcatac
tctgctataccagaggagccagaaagcttgttgcctcctagccattctttgctaggaaca
aaatttttatctcagccgagtaccgatggccacgttcgcatcttggagacagatgtcggg
atctcagagtacatcgcgaaagatgtaccgaaaatcgacgggataatcaagcaaaggttc
acagactttctggtgtacgaggtcgatctcgatcacaacgtcatacatatcaagtctctg
gacatgccagaatccccatcaaaaaaggacaaagatgaggctgcgcctgtgactgagctt
tctgcctcaggcgaagccatgcaaggcatcgaatctacatcaactcctgcagacgccaaa
attgtcgaggaaacaccatctgtggtccctgcagagcctgctttcgaaactcctcagccc
tctgacgctcctgaacccgtcactccagaaactcctgcagacccttggcctgaaaccttc
acgacacgcctcgcgaccttcctttccgaggaaaaagtcgctctgctgaagcagatgttc
ttggaaggaccagagccaccgttcgtaagtgatgccgggtggggaggtcgctcgacgacg
aatgaggtaagtccatcggtcgccgagactgtcgaggagaaggcaaaagatgaatctgag
gaagtcgtcgagaaagaagtgaagggtagagggaagcgcggcagagaaagaggtgggaga
ggcgcccgaggaggccgaggcgggagaggtggacgaccaggaagacttggtgcgagagag
gaccataggaaggttttatcagatcctatcgtcgcgaagagcacgcgtacagaactccac
caggcggtgagagagctgtttggcggaaagctcgacagtgagacggatacgaccgcgcct
gcggacgatgaaggatctagaattgtcatcaagtggtcaagaaggggtggtggacgcggt
ggtggtcggggcggtggtcgaggtgacaagggcagcaatagcgaccgcccctcccgcggg
aacttcccaccttacattcacttcacccttcaaaaaacgaaccgtgacacgcaggatgca
ctcgcctacctggcacggacgttgcatgttaatgtgaaggacctctccacggccggcacc
aaagacaaacgtggcgtcaccgttcaacgtgtcgcgctgcgacggggtggaaaggctgtc
gaagacatttggcgtctcgcaaatggcgttcctgggcggcattcggttgaagaagctgtg
cgagaaaggggggagagaggcgtcagaattgcggacctcaattataggaaggcggggcta
gagctcggtatgctcaaagggaacgcattcgtgattacgctcaggaacgtgcaagtcgac
tccacggaaaccttgaatagagctatgaactcaatcaaagaccatggcttcataaactac
tacggtatgcagcgcttcggcacagcatctatcccaacacattccattggactggccctt
cttaaagaagactggcaccgagcagtctccctcatcctacgcacacgccctggagaacat
cccgacgtcgtggcagctcggcaggcatggctagtagatggcgacctcgatcgcgcactc
gaactcatgcctcgtcgggtcgtcgcggagcgctgcattcttgagagctacagaaagcaa
aatggcgagacgcgcaacgccctcggagcgctttcgacgattccacggaatttgcggctc
atgtatgtccacgcttaccagtcctatgtctggaatgcgatcgtatcagaacgcattcgg
acatatggtgcggagaaggcagttgttggcgacctcgtactcgtgtcaaccaaagctacg
gatggcgatatggaagttgacgaagttgaagttgagaccgcgacggataacggtccaagc
agaggaagcagaagggaaaagaaaccttggcagcctgcacaggtgaagacgctcacagca
gaagacgtcgacaggtactccatcttcgatgttgtcatgcccttacccggcaaagatgta
gcttttcccggaggctctctcggagagcgttataaggagttcctgcgcaaagacggtctg
gatcccgataattttaaccggcgtcaaaaagattacagcttgagcgggtcatatcgcaat
atcatgcatctgccgagggagttgtcatgggatgtcctgcggtatactgacccggacgtt
cctctcgcgcagtcagacgaggataaactgctcggatacgatgcgccagctatcgttccc
gatggtcgtttcctcgcgctgcagatccggctgactctcggcacggcggcttatgctacg
atggcgctgcgagaggtgacgaagaccgagacgagctcgcatttccagagcagcctcacg
caagcatctcaggatcaacagttcaagagtgctggagaggctacagcagctgatgtcgat
cctagcgcggataccgatgcggtggtcgtcgaggagttgggcggcgaatag
DBGET
integrated database retrieval system
