KEGG   Heterobasidion irregulare: HETIRDRAFT_381789
Entry
HETIRDRAFT_381789 CDS       T03455                                 
Name
(RefSeq) hypothetical protein
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
hir  Heterobasidion irregulare
Pathway
hir03020  RNA polymerase
hir03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HETIRDRAFT_381789
  09124 Replication and repair
   03420 Nucleotide excision repair
    HETIRDRAFT_381789
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hir03021]
    HETIRDRAFT_381789
   03400 DNA repair and recombination proteins [BR:hir03400]
    HETIRDRAFT_381789
Transcription machinery [BR:hir03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     HETIRDRAFT_381789
  RNA polymerase III system
   RNA polymerase III
     HETIRDRAFT_381789
  RNA polymerase I system
   RNA polymerase I
     HETIRDRAFT_381789
DNA repair and recombination proteins [BR:hir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      HETIRDRAFT_381789
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 DUF7130 DmmA-like_C Zn_ribbon_10 DUF7129 HypA zf_Tbcl_2 DZR MCM_OB DZR_2 zf-C3HC DUF5816 Zn_ribbon_8 Zn_Ribbon_TF Cas12f1-like_TNB Zn_ribbon_LysW DUF7577
Other DBs
NCBI-GeneID: 20672088
NCBI-ProteinID: XP_009543995
JGI: Hetan2_381789
UniProt: W4KH04
LinkDB
Position
Unknown
AA seq 62 aa
MNQPGTQNTNGNGTGTGFMPAPRQEMEYLCADCGAKNEIKSREPIRCRECGHRIMYKKRT
KR
NT seq 186 nt   +upstreamnt  +downstreamnt
atgaatcagcccggcacacaaaacacgaatgggaatgggacagggaccggcttcatgcct
gctcctagacaggagatggagtacctgtgtgctgactgcggcgcgaagaacgagatcaag
tcgagagaacccatccggtgtagagagtgcgggcaccgaatcatgtacaagaaaaggacc
aagcgg

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