Heterobasidion irregulare: HETIRDRAFT_386971
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Entry
HETIRDRAFT_386971 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hir03009
]
HETIRDRAFT_386971
Enzymes [BR:
hir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HETIRDRAFT_386971
Ribosome biogenesis [BR:
hir03009
]
Eukaryotic type
Pre-60S particles
Helicases
HETIRDRAFT_386971
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
20672301
NCBI-ProteinID:
XP_009549092
JGI:
Hetan2_386971
UniProt:
W4JZ21
LinkDB
All DBs
Position
Unknown
AA seq
674 aa
AA seq
DB search
MSRSSKRELERIFVLTANDDERLDLCLPRLLSSKRAESWAGTMTDPSSSTFASFAHLISP
LLLRALADMGFARPTLVQQKAIPLALENRDILARARTGSGKTAAYCVPLVQKVLNAKASI
AAEDESRQVTRALVLVPTKELAEQVSSHLRGLVKYCESDVSISNVASGTTSHLQRILLSD
KPDVVIGTPSKILALLKSKALSLTSLESLVIDEADLILSYGHDEDVRQIFSGGHLPKVFQ
SFLMSATMTEDVETLKGLVLRNPAILRLEEDEDEAANLSQYSVKCSEVDKFLLTYVILKL
KLIKGKCILFVNDVDRCYRLKLFLEQFSIKSCVLNSELPLNSRYHAVQEFNKGVYDYIIA
TDESGRGEQDDDDRDVHAVTVEAGAEAEEFLSTQREPAPEHEADAGSEEPEASTSKKRKR
PSTPPPSKSRKRKTRKDAEYGVTRGIDFIDVACVLNFDLPTSSRSYTHRVGRTARAGRTG
MSLSFIVPSDEFGKDKVIGCVVGTEKDEEVWERIEKEQAARGSKVKDYTFDMKQVEAFRY
RMEDALRSVTKVAVKEARVKELKQELLNSDKLKAHFEDNPLDLEYLRHDKPLHPTRVQSH
MKHVPKYLLPKIAPVPGGAESSEPVGEKSEAGFVPFTKGGARGRGRGRGRGRGGKFGGGG
RGGKKKSDPLKKFR
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgctcttctaagagagaattggagagaattttcgtgctcaccgcgaacgacgac
gaacgtctggatctctgcctgccccgccttctatcttctaaacgagcggagtcttgggct
ggaacaatgacagacccatcttcatcgacatttgcctcgtttgcacatctgatttcccct
ttattacttcgcgctcttgcggacatgggtttcgcgcgcccaacacttgtacaacaaaaa
gcgatcccgctcgcgctcgaaaatagggacatactagcgcgtgcgcggacagggagcgga
aagacggccgcctactgtgtaccacttgtacagaaggttctcaatgccaaagctagcatt
gctgccgaggatgagagcaggcaggtcacacgggccctggttctggtcccgacgaaagag
ttggcagaacaagtgtcttcccacctgagaggcctcgtgaagtattgcgagagtgatgtc
agcatttcgaatgttgccagtggtactacatcgcacctgcagcggatactactctcggat
aaacccgacgtcgttattggtacaccttcgaaaatactcgcactccttaaatctaaggct
ctatccctcacatcgctggaatcgctcgtgattgacgaagctgatctcatcctttcatat
ggtcacgacgaagatgttcgccaaattttcagtggtggccatctaccaaaagtctttcag
agctttttgatgagcgccaccatgactgaagacgtcgagacgctgaaaggtctagtgctg
cgtaatccagcaatattacgattagaagaagacgaagacgaagctgcaaatctaagtcaa
tactctgtaaaatgctcagaagtcgacaagttcctcctcacatacgtgatcttgaagctc
aagctgatcaagggcaaatgcattttgtttgtgaacgatgttgatcggtgttatcgcctt
aagctctttttggagcaattttccatcaagagctgcgtgctgaattcggaattgccgttg
aactcaagatatcacgctgtacaagagttcaacaaaggtgtttatgactatatcatcgcg
acggacgaaagcggaaggggagagcaggatgatgatgacagagacgtacatgcggtcaca
gtagaggctggagcggaggcggaagaatttctatcaacacagcgtgagccagcacctgaa
catgaggcagatgcaggatcggaagagcctgaagccagcacgtcaaaaaaacgcaaacgc
ccttccacccctccaccctccaaatcccgcaaacgtaaaacccgtaaagatgctgaatac
ggtgtcactcgcggaatagattttatcgacgttgcttgcgtgctcaatttcgatcttccc
acttcctctcgctcttatactcatcgagtaggccgcaccgcacgggccggccgcaccggc
atgtcgctctcctttatcgtcccaagcgatgaattcggtaaggacaaggtgattggttgt
gtagtaggcacagagaaagatgaagaggtatgggagcggatcgagaaggagcaggccgct
aggggaagcaaagtcaaggattatacatttgacatgaagcaggtggaagcgttccggtac
cgtatggaggatgcgctcaggtctgttacgaaggttgcggtgaaggaggccagagtgaag
gagcttaagcaggagcttttgaactcggacaagttgaaggcccactttgaggacaaccct
ctcgacctggaatatcttcgtcacgataaaccactacacccgactagagttcaatcgcat
atgaagcatgtgccgaagtacctattgccgaaaatcgcgcctgtacctggtggggcggag
tcaagtgagcctgtgggagagaagagcgaggccgggtttgtgcctttcaccaaaggcggc
gcccgcggacggggacgagggagaggtaggggacgaggaggaaagttcggtggcggcggc
aggggtggtaagaaaaagagcgacccgctcaaaaaattccggtag
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integrated database retrieval system
