Heterobasidion irregulare: HETIRDRAFT_388136
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Entry
HETIRDRAFT_388136 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K14844
pumilio homology domain family member 6
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_388136
03009 Ribosome biogenesis [BR:
hir03009
]
HETIRDRAFT_388136
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
HETIRDRAFT_388136
Ribosome biogenesis [BR:
hir03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
HETIRDRAFT_388136
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPL
PUF_NOP9
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
20672352
NCBI-ProteinID:
XP_009550054
JGI:
Hetan2_388136
UniProt:
W4JYV4
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MEEEEELDGHDHDLEGDSLDGDGEGQGKGEGDGDVDMESTQKPKDPNAARESHKIQKALQ
AERRAAKPHSDLLTEAKRAWSLARQQNIAKSERKKHIAALEAVVKGKYQEIVFKHDASRI
VQTVIKYGDQKQRDAVAVELKGRYKELAQNKYSKFLVTKIIRLCPAHRLSILLEFQSHVI
RLLLNREASHAIADTFELYANAYERAVLLRDFYGKETTLFSKSTGNESVEEKDEFKKGLR
GVLEGVDSDRRKRVLSSLKDNLLNIFNNSEKGSVRHAIVHRALWEYMIEVEESPEEEERE
KLRREMFENCQDILAEMVHTKDGSRVVREFLARGTAKDRKIIIKTIKPYIETMANDDEAQ
LVLFTALDVVDDTKMLAKSLIPSLTAHASTLHKTSQGRRTLLYPLVPRSRRHFTPAMIVS
LEETDALREKTSKKDVDVRVAEVRSAASQELLDWVTKDGAAVCRETGGSLIVLEILLEAE
GDKTLAMETLLRPLASPYPSEDPSTPHPIDLPHTSRLIKNLLQGGHFSHSTRTVEKSSRF
SAKEFAEMFVRLVGKETTVAMAKGSGAFVVAELVERVSAEGSDETKGELKEWMKRIGSAG
DEVKGWGVLMEKVEALKV
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggaggaactggacggccatgatcatgacctggaaggtgacagtctggac
ggggacggagaagggcaaggcaaaggcgaaggggacggggatgtggacatggagtctact
caaaaaccaaaagatcccaatgctgcgcgtgagtcccacaaaatccaaaaggccctccag
gcagagcgccgcgccgcgaaaccgcactctgacctcctcaccgaggcgaagcgcgcttgg
tcgctcgcgcggcagcaaaatattgccaagagcgagcgtaagaagcacatcgcagccctc
gaggctgtcgtcaaaggcaagtaccaggagatcgtgttcaagcacgatgcgagccgtatc
gtgcagacggtgatcaagtacggagaccagaagcagcgggacgcggttgctgtcgagctg
aaggggcggtataaggagctggcgcaaaataagtactcaaagtttttggtgacgaaaatc
atccgcctgtgccccgcccaccgcctgtccatccttctcgagttccaatcccacgtcatc
cgcctcctcttgaaccgcgaagcgtctcacgccatcgcagacacttttgagctctacgcc
aacgcatacgagcgcgcggtcctgttgcgcgatttctacggcaaggagacgacgctgttc
tcgaaaagcaccgggaatgagagcgtggaggagaaggatgagttcaagaaagggttgaga
ggagtgttggagggcgtggactctgacaggcggaagagggtgctgagttcattgaaggac
aacttgctcaatatcttcaataactcggagaagggatccgttcggcatgctatcgtgcat
agggcgctgtgggaatatatgatagaagtcgaagaatcaccggaggaagaggagcgggag
aagcttcggagagagatgtttgagaactgtcaggatatcttagcggagatggtgcacaca
aaggacggcagccgtgttgtccgcgaattccttgctcgaggaacggccaaggacaggaaa
attataatcaaaactatcaagccatacatcgagacaatggctaacgacgacgaggctcaa
ctagtactctttactgccctggacgttgtcgacgacacgaagatgctcgctaaatctctc
atcccttctttgaccgctcacgcttccacgctccacaagacctctcagggtcgacgtacc
ctcttgtacccgcttgttccccgctcacgtagacattttacgcccgccatgatcgtctct
cttgaggagaccgacgccctgcgcgaaaagacaagtaaaaaagacgtggacgtgcgtgtg
gccgaggtcaggtctgcggcgagtcaagaactcctggattgggtgacaaaggacggggct
gcggtgtgtagagagacaggcggaagcttgatcgtgctggagatcctgctcgaggctgag
ggcgataaaacattagcgatggaaaccctcctccgtcctctcgcgtccccgtatccctcc
gaagacccatcaacccctcatccaatcgacctcccacacacctctcgtctcatcaaaaac
cttctccaaggcgggcacttctcgcactccacacggaccgtcgagaagtcctcccggttc
tctgcaaaggagtttgcggagatgttcgtgcggcttgtggggaaggagacaactgttgcg
atggccaaggggtcaggcgcgttcgtggttgcagagttggtcgagagggtgtcggcggag
ggaagcgatgagacgaagggggagctcaaggagtggatgaagcgcatagggagtgctgga
gatgaggtcaaggggtggggtgtgctcatggagaaggtggaagcattaaaagtatga
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