Heterobasidion irregulare: HETIRDRAFT_388232
Help
Entry
HETIRDRAFT_388232 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K14007
protein transport protein SEC24
Organism
hir
Heterobasidion irregulare
Pathway
hir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
HETIRDRAFT_388232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hir04131
]
HETIRDRAFT_388232
Membrane trafficking [BR:
hir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
HETIRDRAFT_388232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
20672360
NCBI-ProteinID:
XP_009550136
JGI:
Hetan2_388232
UniProt:
W4JX49
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MYAHGARIPQPPHSAGMTLQGLRTHIDPSQVPSPVDGIEADRDKWEKEVYMTLPGSHVPL
STTNCVAIDQGNSSSRFIRMSTWNIPSTSRLARELDIPIVAVIQPFADTDPREEEVPIVE
SGPAGPVRCALCRGYINAWCTFTAGGGRWKCNLCGHETEVTPDYFCNLDANLRRLDHEQR
PELNKGTVDFAVGENYWAPHPPPRLSPSYYTVEPPPTTPNRKPQPMAYLFALDVSQEAVQ
SGFLRAACASLRSILYGGIGADGSEIQPCFPTESVLGIITYDETLHFYDLSSDSDQARLL
VVSDIDEVFVPLRDGLLAHPQGSRTVIESLLAQLPDRHESTLIARSCLGSALCAALASLA
GRGGQVVVFQSCLPTIGAGALEPRSDEGKLYDTDKERSLYRPQNTSWQNIAEYLAEEGVG
VSMFLGMREFIDVGSIGVVASITGGELFFHPRFDIRRDGPTFDSQIRRLVSRTTGYSCAL
RVRCSDGLRIEKHYGNFNQRTATDLEFGTLDADKAVSVLIEHTRSLDERQYAFLQCAVLY
TTVGGHRRVRVCNLALQVAALAGSVFRFADMDALVVHMLRHSISELATKKMSMIRDDLTE
MCSAILYSYRRNCAASTSASQLIIPEAFRALPMYSLAIHKSKPLKARNVSSDVRNFHAHR
LSALSVRSTMFHLYPRLLAIHDLDDQIALPNAEGWVDMPSLMRASHLFMVAHGIYLVDNE
DMMILWIGAGASPQLLLDMFGVDDFANLDPHLSELPVLHTRLSAQIRNIVAQRRTERGGR
ATKMLVARQNVDASEIEFSDLLVEDQNNASLSYIDYLSLVHKQIAAAMQNGISLSSSASV
KAIW
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcacacggtgctcgcataccgcagccacctcatagcgctggaatgaccctccaa
ggacttcgaacgcacattgatccaagccaagtaccttctccagtcgacggaattgaagca
gaccgtgacaaatgggagaaagaggtatacatgactttacccggaagtcacgtccctctt
tccacgacgaattgtgtggctattgatcaaggcaattcttcttcaagattcattcgtatg
tcgacctggaatattcccagcacgtcccggctagctagagaacttgacatacccattgtc
gccgtcatacaacctttcgctgacaccgacccgagagaagaagaagttcccatagttgaa
tctggacctgctggacctgtacgatgcgcgctctgccgaggatacatcaatgcatggtgt
actttcacggctggagggggtcgttggaagtgtaatctatgcggacatgagacagaagtc
accccagactacttctgcaacctcgacgcgaaccttcgacgactcgaccatgaacagcgg
ccagagttgaacaagggtacagtcgactttgccgttggtgaaaactactgggcgcctcat
ccaccgcctaggttatctccgtcgtactataccgtagaacccccgccgaccactccaaat
cggaaacctcagcccatggcctatttgttcgctttggacgtctcgcaagaggctgttcag
tcagggtttctaagagcagcatgtgcatcactacgatcgatcttgtatggtgggattggc
gcggacgggagcgagatccaaccatgcttccctacagaatcagtgttggggatcatcacc
tacgacgaaacattgcatttttatgatttatcgtctgactctgatcaagcgcggttgctg
gtcgtctcagacatcgatgaagtctttgtgccactacgagatgggctgctagcacaccct
caaggctctcgaacagtgatcgaaagcctactggctcagcttccagatcgccatgaaagc
actttgattgcaagatcttgtctaggttccgctctctgtgcagctctcgcctcactggcc
ggccgaggcggccaagtggtcgtcttccagagctgtcttccaactattggtgctggcgcg
cttgagccacggtctgacgagggcaagctatatgacactgataaggagcgatccctgtat
aggccccaaaacacttcctggcaaaatatcgccgaatacctcgccgaggagggtgtaggt
gtgagtatgttccttgggatgagagaatttatcgatgtgggctcgataggtgtcgtcgcc
tccatcaccggcggagaacttttctttcatcctcggttcgacataaggcgcgacggcccg
acctttgattcgcaaattcgacgcctggtatctcgcactacgggatatagttgtgcgttg
cgggtacgctgctccgacggcttgcgaatagaaaagcattatggaaatttcaaccagcgt
acagcgacggacctggaattcggcacattggacgcggacaaggccgtttctgtgctcatc
gagcatacccggtcactcgatgagcgacagtacgcattcttgcaatgtgcggtgctatat
acgacggtgggaggccatcggagggtgcgggtttgtaacctggcgctccaagtcgcagcc
ctggccggttctgtcttccgtttcgcagacatggacgctctcgtcgtgcatatgctacgg
cattcgatatcagagttagctacgaaaaaaatgtccatgattcgagacgacctcaccgag
atgtgttcagccatcctgtattcgtaccggagaaattgtgcagcgtcgacttccgctagt
cagctcatcatccccgaagcgttccgtgccttgccgatgtattctctcgcgatccacaag
agcaaaccattgaaagcccgcaatgtctcttctgacgtgcgcaacttccacgctcaccgg
ctatctgctctcagcgtgcgcagcacgatgtttcatctatatccgcgtctgctcgcgatc
cacgatctcgacgaccagatcgctcttccgaacgctgaagggtgggtcgacatgccgtcg
ctcatgcgggccagccacctattcatggtcgctcacgggatatatctcgttgataatgag
gacatgatgatattgtggataggggcaggtgcctcaccgcagctgcttctcgacatgttt
ggtgtcgatgatttcgcgaacctagacccgcatctgtccgagctcccagttctccatacg
cgcttgtcggcgcagattcggaacatcgtagcccaacgacggacggaacgtggcggacgc
gccacaaagatgctcgtcgcacgacagaacgtcgacgcgtccgaaattgagttcagtgac
ttgctcgtggaagaccagaacaacgcctcgctgtcctacattgactatctgtctctggtc
cacaagcaaattgccgcggcgatgcagaacggcatctccttgtcctcttctgcgagtgtg
aaagcaatctggtaa
DBGET
integrated database retrieval system