Heterobasidion irregulare: HETIRDRAFT_389478
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Entry
HETIRDRAFT_389478 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K12877
protein mago nashi
Organism
hir
Heterobasidion irregulare
Pathway
hir03013
Nucleocytoplasmic transport
hir03015
mRNA surveillance pathway
hir03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HETIRDRAFT_389478
09122 Translation
03013 Nucleocytoplasmic transport
HETIRDRAFT_389478
03015 mRNA surveillance pathway
HETIRDRAFT_389478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_389478
03041 Spliceosome [BR:
hir03041
]
HETIRDRAFT_389478
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
HETIRDRAFT_389478
Spliceosome [BR:
hir03041
]
Complex C
Other components
EJC/TREX
HETIRDRAFT_389478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
20672413
NCBI-ProteinID:
XP_009551363
JGI:
Hetan2_389478
UniProt:
W4JUA6
LinkDB
All DBs
Position
Unknown
AA seq
147 aa
AA seq
DB search
MSSYDKDPFYLSTGHSGKHGHEFLEFEYSHGRLRYANNSNYRNDSLIRKEMWVGPLVVKE
LKRIVEQSEITKEDDTNWPKKNIVGKQELEIRVGNDHIAFETAKVGSLADIQDSEDPEGL
RVFYYLVQDLRCLIFSLISLHFKIKPI
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcatacgacaaagaccctttctacttgagtacgggccactctggcaaacacggg
cacgaatttcttgaattcgagtactcgcatggccgcctccgatatgctaacaactctaac
taccgcaatgactctctaatccgcaaagaaatgtgggtaggaccgttggtagtgaaggag
ctcaagcgcattgtagagcagagtgagatcacaaaggaagatgacactaattggccaaag
aaaaatattgtggggaagcaggagctcgagatccgcgtgggcaatgaccacatcgcattt
gagaccgcgaaagttggctcgttagccgatatacaggatagcgaggacccggaaggattg
cgtgtattctattatctggtgcaggatctccggtgcctcatcttctctctcatttccctt
catttcaaaatcaaaccaatttag
DBGET
integrated database retrieval system