Heterobasidion irregulare: HETIRDRAFT_389554
Help
Entry
HETIRDRAFT_389554 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K15072
SCF-associated factor 1
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hir04121
]
HETIRDRAFT_389554
Ubiquitin system [BR:
hir04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
HETIRDRAFT_389554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
RCC1_2
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
20672417
NCBI-ProteinID:
XP_009551420
JGI:
Hetan2_389554
UniProt:
W4JSK7
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MPSIAYVPVEVFLDNIFHLLPVSDLIALSLTCKYFSRICEDDAYWKGRCAADFDLFGNET
AQQHGWKALYRELSYPKLFVWGCRSEGRLGPNSYRPLRGSGVPFPTEIEIPGIRLVSLAA
SGWSFHALDSKGSVYVWGTLNGESTSHGQGFNSPFKCAPTPHRLILPETVRRISCGRHHM
MALDDKTQVWTFLSWGRPFRLQSTLLDCHSPLTTPVQIECGWMFSTILTGSGDVLLYWPH
RGNLQHFIDANDRALNKQGDGNEARASEDGAIPCVTSVIQADPYRLPAIPALPNLPDTGL
TQEQLDRETRLIKIAAYDNNLVGLTNKGHVLKFGGLGSRKEYLRSRWEYLPNFSEAARVC
SHPTFAGQNAVCEPPKTMRITHLSAHFRTFVAYSRGPSSVVLMGGQSTNVRSRPQILPAL
QYRSIVSVTLGDYHFGAVTSTGELLTWGAYSKGALGLGDPLELPLGAPGGYQTAAEVEDA
RTNWWIEPPRVNEPVEVKFDRGKKRGRRRCVAASASGWHTGALVNGFESDVAEECVEDDC
T
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgccctcgatagcctacgttcctgtcgaagtcttcctcgacaacatcttccatctcctt
cccgtctctgatctcatcgctctctcgttgacctgcaaatacttctcccgcatatgcgag
gatgacgcctattggaaagggcgctgcgccgctgatttcgacttgttcggaaacgagacc
gctcaacaacatggatggaaggcattgtatcgagagctcagttaccctaagctctttgta
tgggggtgccgcagcgagggcaggcttggtccaaattcgtatcggccgctaagaggttcg
ggtgtgcctttccctaccgagatcgagattccagggatacgcctcgtctctttggccgcg
agtggatggtcgtttcatgcgttggactccaagggctctgtgtacgtttggggtactttg
aacggggagagtacgtcacatggccagggcttcaatagtccgttcaaatgtgcaccaacc
cctcacagacttattctccccgaaaccgttcgaaggatcagctgtggtaggcatcatatg
atggcgctcgatgacaagactcaagtttggacattccttagctggggacggcccttccga
ctccagtccactctgttggactgtcattcacctttaacgactccagtacagatcgaatgt
ggctggatgttttcgactattcttaccggctcgggcgacgtgttgttatattggcctcac
cgcggcaatctacaacacttcatagacgcaaatgacagggcgttgaacaagcagggcgat
ggtaacgaggctcgtgcttcggaggatggtgccatcccctgcgtgacgagcgtcatacag
gctgacccatacagactccctgctattcccgcccttcctaaccttccggacactgggctt
acccaagagcagctagacagagagacaagattgatcaaaattgccgcatacgacaataat
ctggttggccttaccaataaaggccacgttctcaagtttggcggcctaggcagtcggaaa
gagtatctccgaagtcgctgggaatatctgcccaacttcagcgaggccgcccgtgtctgc
agccaccccacatttgccggccagaacgcagtatgcgagccgccaaagacgatgcgtata
acccatctctctgcgcactttcgcacattcgtagcttactccaggggtcccagttctgtc
gtcctcatgggcggtcaatcaaccaatgtccgctctcgaccccagatattgcccgctctg
cagtaccggtctatcgtttcggtgactcttggggattaccattttggcgctgtgacctct
accggagagctcctgacatggggtgcgtactccaaaggcgcactcggcctcggggatcct
ttagagttgcctctcggtgcacccggcgggtatcagacagcagcagaagttgaggacgct
cgaacaaactggtggatcgagcctccgagggtcaatgagcccgtcgaggtcaagtttgat
cgcgggaaaaagagaggaagacgacgttgcgttgcggcatccgcgtcggggtggcataca
ggtgctctggtgaatggcttcgagtctgacgtcgcagaggaatgtgtagaggacgattgt
acatag
DBGET
integrated database retrieval system
