Heterobasidion irregulare: HETIRDRAFT_390120
Help
Entry
HETIRDRAFT_390120 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_390120
03036 Chromosome and associated proteins [BR:
hir03036
]
HETIRDRAFT_390120
Enzymes [BR:
hir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
HETIRDRAFT_390120
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
HETIRDRAFT_390120
Chromosome and associated proteins [BR:
hir03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
HETIRDRAFT_390120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
AAA_30
UvrD-helicase
AAA_16
AAA_22
ResIII
DEAD
Helicase_RecD
NPHP3_N
zf-BED
AAA_7
UvrD_C_2
AAA_5
AAA
nSTAND3
ATPase_2
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
20672439
NCBI-ProteinID:
XP_009552018
JGI:
Hetan2_390120
UniProt:
W4JRQ3
LinkDB
All DBs
Position
Unknown
AA seq
935 aa
AA seq
DB search
MQAHVNGRAHSTDESNTLPGPVAVPGASWCDVCRILVYVGTQGFDAHTQGKCHKSNVELM
STGASPGAIPIPEGFARCDVCQKTFKRSKRNLHLKSQQHLNQQKYVGIDKTLGDASDDGD
IIIHPTDGHDFGVVERADDQSLFASSVARFTIHLDACAPASLRSCPKVSLIEVKLSSSQS
LQTDMFSSFLVEIEGDSRWIEPDTSLRVMVTLIPSYEGRFEDSLLFVFHNFSSKTDLTIS
RPVSGIAGSLIDQKRLRVPETPHRSRRPPRPNPSNFVPLKPPTWTRTQYENLLPEFPLPS
TFAETLHSSKFDKEIKHAAQAPMPVELNVDTYRDYFETLLWLEEAYIRCALCLYFGDSYS
DLSSKIDFAHEDELNLPDIKVGDYLILDQLSTDTCYEVRIHSGGYLFMEDGFVGPLVLRV
PKGFSTYRGFKFGLRFVLNRMPLRRMHLAVSAPFKFGPARVLFPTLTPTPTTPAYDVGEI
EFYNLSIGQDEEQTRTICSILYLPPGSVPFILYGPPGSGKTATITEAILQLLKRRSSCRI
LACCPSNSAADELTTRLSTHLSTGDMFRLNAFSRPLQDCREPVVPYTLSNDHDTFAFPPK
SAMVKFRIVVSTCSSAGVLQSLGIPTGYYSHVFIDEAGQAEEPLTLIPIAAVAGHDTNII
LAGDPKQLGPVVKSHNVGLRRSFLERLMSQKIYDPAVGDGRTIVQLKNNRRSHEAIFTFS
NQRFYDNQQQCAGDPKITHSLLGSSVLVNKAFPVVFHGIQGRDRYGNSRSFYNIEEISLV
KKYCRDLVGDRERRVEAAEIGVISPYRMQVRAIRRSLKEENLGDVTVGSVEQFQGQERRV
IIFSTVRSNTKTTERKSAGFIGDPRRLNVALTRAQALLIVIGDPAVLGKIPLWRGFLNFV
HMRGGHTGKNFDWDSATDEPDATELVDHVRTRIMK
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgcacgtcaacggacgggcgcactcgacggacgaatcgaacactctaccagga
ccagtggcagtcccaggagcatcttggtgcgatgtatgccgcatactcgtgtatgtggga
acgcaggggttcgatgcgcatacacagggtaaatgccacaaatcaaatgtcgaattgatg
tccacgggcgcttcgccgggcgcaatccccatccctgaaggattcgcgcgttgcgatgtc
tgccagaagacatttaaacgatcgaaacggaaccttcatctcaagtcacaacaacatttg
aatcagcagaaatatgttggtattgacaaaactctcggtgacgcctctgacgatggcgat
attattatccatcctacagacggccatgactttggcgtcgtggagcgggccgatgaccag
tctctgttcgcctcaagcgtggcgagattcaccatccatcttgatgcgtgcgcgcctgca
tcgctgaggtcatgccccaaggtctcattgatcgaggtcaagctatcatcctcgcagtca
ttgcagaccgacatgttttcaagcttccttgtagaaatcgagggagattcaagatggata
gagccagatacctcgttgcgtgtcatggtgactctgattccttcttacgaaggccgcttc
gaggacagccttcttttcgtgttccataacttctcctcaaagaccgatctcacaatctct
cgcccagtgtccggcatcgcaggttcattgattgatcaaaaacgcctgcgagttcctgag
acgccccacagatcccgtcggccgccacgacctaacccttcgaactttgttccattgaag
cctcccacatggacgagaacacaatatgagaacttgcttcccgaatttcccttgccatcg
acgtttgcagagactctgcactcatcaaagtttgataaagagatcaagcacgctgcccaa
gcgcccatgccggtcgaactgaatgtcgacacgtatcgagattacttcgagactttattg
tggcttgaagaggcgtacattaggtgcgctctatgcttgtattttggcgacagctattct
gacctttcaagcaagattgatttcgctcacgaagatgagctaaatttgccagacatcaaa
gtcggagactacctcatactcgaccaactatcgaccgacacatgctatgaagtgcgcata
cattcaggcgggtacttattcatggaagacggatttgttggaccacttgtccttcgcgtg
ccaaaggggtttagcacataccgtggcttcaagttcggcttgagatttgtactcaatcgg
atgccgctacgtagaatgcatctcgcagtatcagccccgttcaaatttggtccggccagg
gtgctttttcctacactgacaccgacacccacgactccggcatatgacgtcggcgagatc
gagttttacaacttaagcattgggcaggatgaggaacaaactcgaacaatctgttcgata
ctgtatctgccgcctggtagcgttccatttatcctgtatggcccccccggctcagggaaa
acggccacgatcacggaggcgattctccaactactcaagcgtcgctctagctgcaggatt
cttgcatgttgccctagcaattctgcagctgatgaactaacgacacgcctctcaactcac
ttgtccacaggcgacatgtttcgtctcaatgccttttctcgacctttgcaggattgtagg
gagccagtggtaccgtacactttgagtaacgatcatgatacgttcgcttttcctcccaag
tctgccatggtcaaattccgcatcgttgtgtctacctgcagctcggcgggcgtccttcag
agccttggtatacccaccggctattacagtcatgtcttcatcgacgaggccgggcaggcc
gaggaacctttgaccttgattcctattgccgccgttgcgggccacgataccaacatcatt
ctagctggagatccaaaacagttgggacctgtcgtaaagtcgcataacgtcgggttgcgg
cgtagcttcttggagaggctgatgtctcaaaaaatatatgaccctgcagtcggggacgga
cggacgatcgttcaactcaagaataacaggagatcgcacgaagcaattttcaccttttcc
aatcaacgtttttatgacaatcagcaacagtgtgccggggaccctaagatcacgcattcc
ctgctaggcagctctgttctcgtgaataaagcattccccgtcgttttccacgggatccag
ggaagggacagatacggaaattcgagatcgttttacaatatagaagaaatttcgctcgtc
aaaaaatactgtagggaccttgtcggggatcgagagagacgtgttgaggcggcagagatc
ggtgtgatcagcccgtaccggatgcaagtccgggcgatcaggagaagcctcaaagaagag
aacttaggcgacgtgactgtcggatcggtcgagcagttccaaggacaggagcgacgggtc
atcatattttcgacagtgcgaagcaacacgaaaaccaccgaaaggaagtcagcgggcttc
atcggagaccctcgtcgtctgaacgtcgcgctgacgcgcgcgcaggcgctgctgatcgtc
atcggcgacccggcggtcctgggcaagatcccgctgtggcgtgggttcttgaactttgtg
cacatgcggggtgggcacacggggaagaacttcgactgggactctgcgacagacgagcct
gacgcgacggagctcgtggaccacgtcaggacgagaattatgaagtga
DBGET
integrated database retrieval system
