Heterobasidion irregulare: HETIRDRAFT_407655
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Entry
HETIRDRAFT_407655 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K08266
target of rapamycin complex subunit LST8
Organism
hir
Heterobasidion irregulare
Pathway
hir04136
Autophagy - other
hir04138
Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
HETIRDRAFT_407655
04136 Autophagy - other
HETIRDRAFT_407655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hir04131
]
HETIRDRAFT_407655
Membrane trafficking [BR:
hir04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
HETIRDRAFT_407655
mTORC2 complex
HETIRDRAFT_407655
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_WDR41
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_IFT140_2nd
Beta-prop_Nup120_160
Beta-prop_VPS8
Beta-prop_IP5PC_F
Tricorn_2nd
Hira
Ge1_WD40
Beta-prop_NWD2_C
PEP5_VPS11_N
WDR54
Beta-prop_RSE1_2nd
Beta-prop_WDR75_2nd
TAF1C_beta-prop
Nucleoporin_N
PALB2_WD40
Beta-prop_WDR19_2nd
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_WDR35_2nd
Beta-prop_NOL10_N
PAN_3
DUF6923
Motif
Other DBs
NCBI-GeneID:
20672619
NCBI-ProteinID:
XP_009542576
JGI:
Hetan2_407655
UniProt:
W4KIS4
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MSVILVTGSYDHEIRFWEAWSGICSRTIARSGEIGQVNRLAISPDKRLLAAAIHKKVNVY
EIASSSSTPAITFDAHTMNVTSVSFHSQGKWLVTGSEDGTIKIWDLRSTNLHRNYNNEAP
VNDVCVHPNQGELISCDQAGRIKQWDLSENICTHELTPAGDVPIRSVTLASDGSCLVAGN
NKGKCYVWKINEESSQLPRFQAVTKFQAHSKYLTRCLLSPDVKYLATCSADATVKIWSIS
PNYEFKQDKVLQGHQRWVWDCAFSADSAYLVTASSDHTARLWEMASGETVRQYNGHHKAA
VCCALHDGAG
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttatacttgtcactggctcgtatgatcatgaaatacgcttttgggaggcttgg
agtggtatctgctcaaggactatcgctcgttctggagaaataggccaagtaaaccgactt
gctatctcaccagacaagcggttattggctgctgcaattcataagaaagtcaacgtctac
gagatcgcaagttcatcctcaacaccggccatcactttcgacgcgcatacgatgaatgtc
acgtcggtgtctttccatagccaagggaaatggctagtaacagggagcgaggatgggacg
ataaaaatatgggatttgcgaagcacgaatctccaccgaaactacaacaacgaagctcca
gtcaacgatgtctgtgtgcaccccaatcaaggcgagctgatctcctgtgaccaagcgggt
cgaatcaagcaatgggatttgtccgaaaacatatgtactcacgaactcacccctgccggg
gacgtgcccatacgttctgtgacccttgcatcagatggttcatgcttggtagccggcaac
aataagggcaagtgctacgtgtggaaaattaacgaagaaagctcgcagctaccccgtttc
caagcggtcaccaaatttcaggctcattcgaagtacctcactcgatgtcttctcagcccc
gatgtaaaatatcttgcaacatgttcagccgatgcgacagtcaaaatctggtcaatatca
cccaattacgaattcaagcaggataaagtactccagggtcatcaaagatgggtgtgggat
tgcgctttcagtgctgactcggcatatttagtcacagcttcttctgatcacactgcgcgt
ttatgggaaatggcatctggcgaaacggtcagacaatacaatgggcatcataaagcggcg
gtatgctgcgctctccatgatggcgccggttga
DBGET
integrated database retrieval system