Heterobasidion irregulare: HETIRDRAFT_407963
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Entry
HETIRDRAFT_407963 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K03257
translation initiation factor 4A
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_407963
03012 Translation factors [BR:
hir03012
]
HETIRDRAFT_407963
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hir04147
]
HETIRDRAFT_407963
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
HETIRDRAFT_407963
mRNA cycle factors
Stress granule specific factors
HETIRDRAFT_407963
Translation factors [BR:
hir03012
]
Eukaryotic type
Initiation factors
eIF-4
HETIRDRAFT_407963
Exosome [BR:
hir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HETIRDRAFT_407963
Exosomal proteins of bladder cancer cells
HETIRDRAFT_407963
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
UvrD-helicase
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
20672645
NCBI-ProteinID:
XP_009543077
JGI:
Hetan2_407963
UniProt:
W4KKW6
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MSAEETLQDVPESEIESNWDQVVDNFDNMELKPELLRGVYAYGFERPSAIQQRAIVPVVK
GHDVIAQAQSGTGKTATFSVSILQKLDPNVKGTQALILAPTRELAQQIQKVVVALGDYMN
VECHACVGGTNVREDMAKLQEGVQVVVGTPGRVFDMINRRALRTDTIKIFCLDEADEMLS
RGFKDQIYEVFQLLPQDTQVVLLSATMPADVLEVTKKFMRDPVRILVKRDELTLEGIKQF
YIAVEKEEWKLDTLCDLYETVTITQAVIFCNTRRKVDWLTEKMHSREFTVSAMHGDMEQK
QREVLMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRK
GVAINFVTTDDVRMLRDIEQFYNTQIDEMPLNVADLI
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggaagaaactctccaggatgtccctgaaagcgagatcgagtccaactgggat
caagtcgttgacaattttgacaacatggaactcaagcccgagctccttcgtggcgtgtac
gcctacggtttcgagcgcccgtcggcgattcagcagcgggccatcgtgcctgttgtgaag
ggccacgacgtcattgcacaagcccagtccggtacgggcaagaccgcgacgttctcggtc
tccatcttgcagaagctggacccgaacgtcaagggcactcaggcgctcatccttgcgccg
acccgcgagctcgcgcagcagatccagaaggtcgtcgtcgcactgggcgactacatgaac
gtcgagtgccatgcctgcgtcggcggcacgaacgtccgtgaggacatggcgaagctccag
gagggtgtccaggtcgtcgtcggcacgcccggacgtgtcttcgacatgatcaaccgtcgt
gccctgcgcacggacaccatcaagatcttctgtctcgacgaggccgatgagatgctctcg
cgtggtttcaaggaccagatctacgaggtcttccagctgctcccccaggacacccaggtc
gtcctgctctccgccaccatgcccgccgacgtgctcgaggtgacgaagaagttcatgcgt
gaccccgtccgcatcctcgtcaagcgtgatgagctcacgctcgaaggtatcaagcagttt
tacatcgccgtcgagaaggaggaatggaagctcgacaccctctgcgatttgtacgagacc
gtcaccatcacccaggctgtcattttctgcaacacccggcgaaaggtcgactggctcacc
gagaagatgcactcccgcgagtttacggtttccgccatgcacggtgatatggagcagaaa
cagcgtgaggtcctgatgaaggagttccgctcgggctcgtcccgtgtgctcatcacgacc
gatctcctcgcccgcggcatcgacgtgcagcaggtttcgctcgtcatcaactacgacctc
cccacgaaccgggagaactacatccaccgcatcggtcgtggcggtcgtttcggtcgcaag
ggcgtcgcgatcaactttgtcacgacggacgacgtgcggatgctccgcgatatcgaacag
ttctacaacacccagattgacgaaatgccgctcaacgtcgccgacctcatctag
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integrated database retrieval system
