Heterobasidion irregulare: HETIRDRAFT_408114
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Entry
HETIRDRAFT_408114 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K15222
RNA polymerase I-specific transcription initiation factor RRN11
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hir03021
]
HETIRDRAFT_408114
Transcription machinery [BR:
hir03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
HETIRDRAFT_408114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn11
TPR_2
TPR_1
Motif
Other DBs
NCBI-GeneID:
20672658
NCBI-ProteinID:
XP_009543532
JGI:
Hetan2_408114
UniProt:
W4KFI1
LinkDB
All DBs
Position
Unknown
AA seq
248 aa
AA seq
DB search
MPSPMNDHIFLFEFMNKKTSLTARDIHIRRLYDVIQLSIHRDEYLRARRAFGILARCKEI
KWKDLWKLALLILADSEELTTSKDGSFTRLEFLRMMMLQHREDRETIFQELVLLLVLTGR
SKEALDELQLYLPSFPYQDNPVLHVYAGLVCLDLAQPPPIIERTSIQDRSIGRSFNENLV
REARGHFERALALDPDNVVPSSFLEKLPQITQRIHDSAVETETENDSDGGRSNTDAFGGD
QPRKRIRS
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctcctatgaacgaccacatatttctattcgaatttatgaacaagaaaacgtct
ctcacagctcgggatattcacatacggcgtctctatgatgttatacaactctccatccat
cgggatgagtatcttagagcaaggagagcgtttggcatcctcgcccgatgcaaggagatc
aaatggaaagacctatggaagcttgctcttttaatcctcgctgatagcgaggaacttact
acatctaaggacggaagcttcacgcgattagagttcttgcgcatgatgatgttgcagcac
cgagaagatcgggaaaccattttccaagaactggttctactattggttctgactggaaga
tctaaagaagctctggacgaacttcaattgtaccttccatccttcccataccaagataat
cctgttctgcatgtgtatgcaggtcttgtatgccttgatctcgctcaacctccacctatt
atcgagcgaacatcgattcaagacaggtcaattggccgatcatttaacgagaaccttgta
cgagaagcccgcggacatttcgaacgtgctctggcactagatcccgacaacgtcgtccca
tcatctttcttagaaaagctcccgcagataacgcaacggatacacgacagtgctgttgaa
actgaaaccgagaatgactcagatggcggaagatcgaacactgacgcctttggaggggac
caaccgcgcaaacgcatccggagctaa
DBGET
integrated database retrieval system
