Heterobasidion irregulare: HETIRDRAFT_408984
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Entry
HETIRDRAFT_408984 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K14284
nuclear RNA export factor
Organism
hir
Heterobasidion irregulare
Pathway
hir03008
Ribosome biogenesis in eukaryotes
hir03013
Nucleocytoplasmic transport
hir03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HETIRDRAFT_408984
03015 mRNA surveillance pathway
HETIRDRAFT_408984
03008 Ribosome biogenesis in eukaryotes
HETIRDRAFT_408984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_408984
03009 Ribosome biogenesis [BR:
hir03009
]
HETIRDRAFT_408984
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
HETIRDRAFT_408984
mRNA cycle factors
Stress granule specific factors
HETIRDRAFT_408984
Ribosome biogenesis [BR:
hir03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
HETIRDRAFT_408984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
TAP_C
LRR_NXF1-5
LRR_9
NTF2
LRR_4
Motif
Other DBs
NCBI-GeneID:
20672742
NCBI-ProteinID:
XP_009545299
JGI:
Hetan2_408984
UniProt:
W4KAZ5
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MFSTPAASSSAVATNALRSAGLMDRDERMRDATDKPGGRKGTSKIRSHRPRLIDAIKDPA
GPSRNSMLASRMGVASSEPLSIRGAARPTAAGRIRRNAISVNTAKSSTITGKPLEIWREF
VQKRYNRDLRFLNLERMSEDTILSKACLVPPGVPGSSGKEAAVIFKMASQLRPPVRSLSL
ANNNLSSTHIISTLPHYLPDLANLSLENNNLRTWKDIDSLSQVSDKRDKLKNLRELILLG
NPVREQQNRGDQYKNHIIRRFPTLEMLDKEAVTKIAFDNPAASAPASSTVRRPIATAFPS
EMRPPFVTGVDGSIVSNFFARFFPLFDNHRAGLMDVYYESATFSFQANTHIPDRARIQGF
QHSKEMPKQSHLQWPSWLAAGSRNLSRVAGAVDKMVQSLHVGREEVVKAISSLPQTIHDV
AAAPEKFCVDAWPITQDEKTILFLSVHGQFIEAPAGGIRSFDRSFVLAPASPGSRAQVNG
WGVEILSDQLVIRNYSSHEAWKPGPLLVQANPSTSSLSAPAPQITIAPAMQEALSVIPEP
QRSLVLQISQRTRLNVRFAVDCLEGNGWVLEKALANFEQVKNTLGPDAFV
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgttttctaccccagccgccagttctagcgcagttgcgacaaacgctttgcgcagtgcg
ggcctcatggatcgcgatgagcgtatgcgggatgccactgacaagcctggagggcggaag
ggaacttccaagattcggtcgcatcgtccgcgtctcattgatgctattaaggacccagca
ggcccaagtcggaactctatgcttgcctcgaggatgggagttgcttcttctgaacctcta
tccatccgtggcgctgcaaggccgacagcagcgggtcgcatccgaaggaatgcaatctct
gtcaacaccgccaagtcttctactatcactggaaagccgcttgaaatatggagagaattt
gtgcagaagcgatacaaccgcgacctacgcttcctgaatctcgagcgaatgtcagaggat
acaattctgagcaaggcttgtttagttcctccaggtgttccaggcagttctgggaaggaa
gcggcagttatcttcaagatggcatctcagcttaggcctccagtgcggtctttgtccctc
gccaacaacaatctctcgagtacacacataatctccactctcccgcattatctaccggac
cttgcgaatctttcactggagaataacaatctacggacatggaaagatatcgactctctt
tcccaagtatcggacaagagggacaagctgaagaatttgcgagagctcattttattggga
aatccagtccgggagcagcaaaaccggggggatcaatacaagaaccatatcatccgtcgt
tttccaacgctagaaatgttggacaaagaagctgtcacgaaaatcgctttcgataaccct
gctgcttcagcgccagcctcttccactgtgcgccgcccgattgcaacagcgttcccttcg
gagatgcgtcctccgttcgttacaggggtagacgggagcatcgttagcaatttctttgca
cgtttcttccccttattcgataatcaccgtgcgggcctcatggatgtttactacgaatct
gcaacgttctcattccaggcaaacacccacatccccgaccgcgcccgcatacaagggttc
cagcattccaaggaaatgccaaagcagtcacatctgcaatggccatcatggttagctgca
ggatcaaggaatttgagcagggtggccggtgccgtggacaagatggtgcagagtttgcat
gtggggcgagaggaggtggtgaaggcgatttcatctcttccgcagacgatacatgatgta
gctgctgcaccggagaagttttgcgtcgatgcttggcctatcacccaagacgaaaagacg
attctctttctttcggttcatgggcagttcatcgaagcacctgctggaggcattcgatct
ttcgatcggtcgttcgtccttgctcctgcatcaccagggtccagagcccaagtgaatggt
tggggtgtcgaaattctctcggaccaactggtcattcgtaattactcaagccacgaggca
tggaagccgggcccgctgctcgtgcaggccaatccttctacatcctcgctctccgcgcct
gcgccccaaataaccatagcgccagccatgcaagaggcactgtctgtaattccagaacca
cagcgctcgctcgttttgcaaataagccagcgtaccagactgaacgtacgatttgcagtg
gactgtctcgagggaaatggttgggtcttggagaaagcgttagccaacttcgagcaagtg
aagaacacgctcggaccggacgcatttgtttga
DBGET
integrated database retrieval system
