Heterobasidion irregulare: HETIRDRAFT_40965
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Entry
HETIRDRAFT_40965 CDS
T03455
Symbol
Rnase_T2_1
Name
(RefSeq) Ribonuclease, T2 family
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hir03016
]
HETIRDRAFT_40965 (Rnase_T2_1)
Enzymes [BR:
hir01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
HETIRDRAFT_40965 (Rnase_T2_1)
Transfer RNA biogenesis [BR:
hir03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
HETIRDRAFT_40965 (Rnase_T2_1)
Prokaryotic type
HETIRDRAFT_40965 (Rnase_T2_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_T2
Motif
Other DBs
NCBI-GeneID:
20672792
NCBI-ProteinID:
XP_009540320
JGI:
Hetan2_40965
UniProt:
W4KMR0
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MFSLSLLWVALSGSAAVSASTINTTFARPLDHLFKRLSTSCGTSGQTSCLNTTAQSNLCC
FEAPGGLLLQTQFWDTNPSTGPSNSWTIHGLWPDNCDGTFKSSCDSSRAYTGISSLLSSQ
GASDTLSFMDDYWVDINGDNEQFWEHEWSKHGTCMSTLHTSCLPSGSAKGAEAVAFFQTV
VKLFKSLPTYDWLAAEGITPSSSQTFTLSQITSALKSQSGVTPALDCDGKNLNQISWYFH
LKGSVIDGKFVAIDAPEAGSCASTGLKYPPKSGTPVSSVSTSNAPGDLPSKATISVLTSS
GAVGGLLSAGTWSVQTPGTYTISGTGSSFTLTSSKGKCAVQSSSLICGSSVSTASTFSAV
TSGSDLLVAFSGSTAFSSSAVPSGAVQQTLVTGNGQSQHVTLALVST
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgttttccctctcattgctttgggtcgccctctctggttcggctgctgttagtgctagc
actattaacaccacgttcgcgaggcctctggaccacttgttcaagcgcttgagcaccagc
tgtggaacttccgggcaaacgtcatgtctgaacacgactgcgcagagtaacttgtgctgt
ttcgaggcccctgggggcttgctgctgcagactcagttctgggacaccaatccttctacc
gggcctagcaacagctggaccattcatgggttgtggccagacaattgcgatggcaccttc
aaatcgagctgtgattccagccgtgcttacacgggcattagttcgctcctttctagtcag
ggagcaagcgacaccctttcctttatggacgactactgggttgacatcaatggcgataat
gagcaattttgggagcacgaatggtcaaagcacggaacttgtatgagcacgctgcacacc
agctgccttccttctggaagtgcaaagggcgcagaggccgtagctttctttcaaaccgtc
gtcaagttgttcaagtcgcttccaacgtacgattggcttgctgccgagggaataactccg
agttccagtcaaacattcacattgtcccaaataacatctgcgctcaagtctcagtcaggg
gtcactccggcgctcgattgcgatggaaaaaatctgaatcaaatcagctggtactttcat
ctgaaagggtctgtcattgacgggaagtttgtcgccatcgatgcaccggaggcaggatca
tgcgcatccactggactcaagtatcctcccaagtctggaacacctgtgagcagcgtaagt
acgtctaatgccccaggagatcttccttccaaggctactatcagcgtgttgacgtcctct
ggtgctgtcggaggactcctttcagcgggtacatggtctgtgcagacaccgggaacttat
acaatatccgggacaggctcgagtttcaccttgacatcatccaagggcaaatgcgcagtc
caaagctcgtctttaatatgcggcagcagcgtctcaaccgcttccacgttctctgcggtc
acgtcaggaagcgacctacttgtagctttcagtggatccacggcattttctagcagtgca
gttcccagtggagccgtccagcagacgttggttacgggcaatggccaatctcaacatgtc
acgctcgctcttgtgtcgacatga
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