Heterobasidion irregulare: HETIRDRAFT_41157
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Entry
HETIRDRAFT_41157 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
hir
Heterobasidion irregulare
Pathway
hir03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HETIRDRAFT_41157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hir03400
]
HETIRDRAFT_41157
DNA repair and recombination proteins [BR:
hir03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
HETIRDRAFT_41157
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
VWA_2
Trypan_PARP
VWA
Motif
Other DBs
NCBI-GeneID:
20672959
NCBI-ProteinID:
XP_009540323
JGI:
Hetan2_41157
UniProt:
W4KPL9
LinkDB
All DBs
Position
Unknown
AA seq
853 aa
AA seq
DB search
MPAERAGYTVTMFLVDVSPSMGKTRVVDGPDGPNGLTRTTEMTHLEWALQFVMLKVQEMI
FNGRKTDKCGVVLFGTEGTDNLIHDTNGGYEHVSEYIQIAQPNAGTLAKLAALRPSDETV
GDPIDALIVGVHTQDKHLDGKKTWTRKVVLLTDGDNPIEIEDWQAIVQKMSALDVKLTVV
GVDFDDEEFGFVQEDKSHIKRENEAFFHKFVDALPNAVMGTLEFALQEVTRPDIKQTKSA
LMGTVLRLGDPDNYPNDSMEIHVKSSKCTALARPKSWKRFAKREMTEEESMDFERARDEG
EDEEKTNVFAELKMRSEYVVDTNPNKADEADEDQDEDEHKDADDETHHLEKIEKEELVRG
FKYGATYVPCPDGQFKRLPTKKGIEICGFFKADGFRREQAMGEVQYLWAEPTSGKDQVAL
SSLVQAMDKHQMYAVTKWVSREGMDPRMGVLAPCRFDKVDCFLWVQMPFADDIRKYTFPP
LENLINKKAERVAKHPYIPTDEQMDAMGHFVDAMDLMQAGEKDEEGNRAPWFDTRLSYNP
AIHRIKQALFHSAVAQDLSSNPLPPPHPELTKYFNPPKRALKRARDAIDDCKAAFRVKEA
PKKVAKTRKDGHVRAQGSDDDALLLDRVPKLAREATQSQRAFAPATSTARATRITLKKND
VDSGSETGSDDDSAELLLGRARRQLPLPTPEPEPTPKLAPKSEPEPEPEQDAESDAETDY
GREPGRIVGTLTPLRDFRRNLARGDVVSKAVEDMGWAVREVVLRPFAARRRAEVLECMAA
LREACLLEDEIDAWNSFLKGLREACLADPGNPSFWQEIRKQGAKMSLIGKSEAKRQGGRS
DVPDDVAHDVSRF
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagagcgcgcaggatacaccgtcaccatgtttctcgtcgacgtctcgccgtcc
atgggcaagacccgcgtcgtcgacggccccgacggcccaaacggcctgacgcgcacaacc
gaaatgacccacctcgagtgggcactgcagttcgtcatgctcaaggtccaggaaatgatc
ttcaatggaaggaagacagacaaatgcggcgtcgtgctcttcggcacggagggcaccgac
aacctcatacacgacacaaacggtggctacgagcacgtctcggagtacatccagatcgcg
cagcccaacgcaggcaccctcgcaaagctcgccgccctccgcccctccgacgaaaccgtc
ggtgacccgatcgacgcgctcatagtcggcgtccacacccaagacaagcacctcgacggc
aaaaaaacgtggacgaggaaggtcgtcctcctcaccgacggcgacaaccccatcgagatc
gaggactggcaggccatcgtccagaagatgtccgccctcgacgtcaagctcaccgtagtg
ggcgttgactttgacgacgaagagtttggcttcgtgcaagaggacaagtcccatatcaag
cgcgagaacgaggccttcttccacaagttcgtcgacgccctgcccaacgccgtcatgggc
accctcgagtttgccctccaagaagtcacgaggcccgacatcaagcagacaaagtccgcg
cttatgggtaccgtcctccggctgggcgacccggacaactacccgaacgactccatggag
atccacgtcaagtcgagcaagtgcaccgccctcgcgcggcccaagagctggaagcgcttt
gcgaagcgcgagatgacggaggaagaaagtatggactttgagcgcgcccgagacgagggc
gaagacgaggaaaagacgaacgtgttcgcggagctcaagatgcgctcggaatacgtcgtc
gacacgaatccaaacaaggccgacgaggccgacgaggaccaggacgaagatgagcacaag
gacgcggatgacgagactcaccacctggaaaagatcgaaaaggaagagctggtgaggggg
ttcaagtacggagccacttacgtgccgtgtccggacggtcaattcaaacgactgccaaca
aagaaaggcatcgagatctgcgggttcttcaaggcagatggtttccgacgtgaacaagcc
atgggtgaggtacagtacctgtgggcagagcccacctccgggaaggaccaggtcgcgctg
tcttcgctggtgcaagccatggataagcaccaaatgtacgccgtgaccaagtgggtctcc
cgcgagggcatggaccccaggatgggcgtcctcgcgccctgtcgcttcgacaaagtagac
tgcttcctctgggtgcagatgccgttcgcagacgacattaggaagtacaccttcccgccg
ctcgagaacctgatcaacaagaaggccgagcgcgtcgcgaagcacccgtacatccccacc
gacgagcagatggacgccatgggccacttcgtcgacgcaatggacctgatgcaggccggc
gagaaggacgaagaaggaaaccgggcgccgtggttcgacacgcgcctgtcctacaacccc
gcgatccaccgcatcaagcaggcgctcttccacagcgcggtcgcccaggacctctcctcc
aacccgctcccgcccccgcaccccgagctcacgaaatacttcaacccgccaaagcgcgcg
ctcaagcgcgcccgcgacgccatcgacgactgcaaggccgcgttccgcgtcaaagaagcc
ccgaagaaagtcgcaaagacgcgcaaggacggacacgtgcgcgcgcagggcagcgacgac
gacgcgttgctcctcgaccgcgtccccaagctcgcgcgcgaggcgacccagtcgcagcgc
gccttcgcccccgccacctccaccgcccgcgcgacccgcatcacgctcaagaagaacgac
gtcgacagcggctccgagaccggatcagacgacgacagcgcagagctcctcctcgggcgc
gcgcggcgccagctgccgctgccgacgcccgagcccgagcccacgcccaaactcgcgccc
aaatccgagcccgagcccgagcccgagcaggacgcagagtcggacgcggagaccgactac
gggcgcgagcctgggcggatcgtcggcacgctgacgccgctgcgcgacttccggcggaac
ctcgcgcgcggggacgtggtgagcaaggcggtggaggacatgggctgggcggtgcgcgag
gtcgtgctgcgcccgttcgcggcgcgccggcgcgcggaggtgctcgagtgcatggctgcg
ctcagggaggcgtgtctgctcgaggacgagatcgatgcctggaacagcttcctcaagggc
ctccgcgaggcgtgtctggccgaccctgggaacccctcgttctggcaggagatcagaaag
caaggcgcgaagatgagcctgattggcaagtcggaggcgaagcggcaggggggcaggtcg
gatgtcccggatgacgtcgcgcacgatgtgagtcgtttttga
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