KEGG   Heterobasidion irregulare: HETIRDRAFT_413246
Entry
HETIRDRAFT_413246 CDS       T03455                                 
Name
(RefSeq) hypothetical protein
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
hir  Heterobasidion irregulare
Pathway
hir03020  RNA polymerase
hir03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HETIRDRAFT_413246
  09124 Replication and repair
   03420 Nucleotide excision repair
    HETIRDRAFT_413246
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hir03021]
    HETIRDRAFT_413246
   03400 DNA repair and recombination proteins [BR:hir03400]
    HETIRDRAFT_413246
Transcription machinery [BR:hir03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     HETIRDRAFT_413246
  RNA polymerase III system
   RNA polymerase III
     HETIRDRAFT_413246
  RNA polymerase I system
   RNA polymerase I
     HETIRDRAFT_413246
DNA repair and recombination proteins [BR:hir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      HETIRDRAFT_413246
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 20673098
NCBI-ProteinID: XP_009540860
JGI: Hetan2_413246
UniProt: W4KM57
LinkDB
Position
Unknown
AA seq 163 aa
MTTASSNIVFDDIFTIKSIDPEGKKFDRVSRLHAHSKNYDMDLTLDYNIELFPLENGQTL
ALALASSLARGGPAVGGTGGADNAAEEEDKDRNVWRPDGKGRRGLEEDYDYVMYGKVYRF
DSGTAEIVTAYASFGGLLMSLTGSFRHMTSIVLGDPVYILLRK
NT seq 492 nt   +upstreamnt  +downstreamnt
atgacaaccgcatcgtcaaacattgtctttgatgacatcttcacgattaaaagtattgat
cccgagggcaagaaattcgaccgagtgtcacgactacacgcgcactccaaaaattacgat
atggacttgacactagactataatatcgagcttttccctcttgagaatggtcagacattg
gctctggcattggcgagttccctcgcccgaggtggccccgctgtcgggggtacaggggga
gcggataatgcggcagaagaggaagacaaggacaggaatgtctggcgaccagatggcaaa
ggtcggagaggacttgaagaagactatgactatgtcatgtacggcaaggtgtatcggttc
gattctggcacggctgagatcgtgactgcatatgcgtcttttggggggctgcttatgtcc
ttgacaggatcattccgccatatgacgagcatagttcttggagatcctgtatacatattg
ctacgcaagtga

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