Heterobasidion irregulare: HETIRDRAFT_413587
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Entry
HETIRDRAFT_413587 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K03231
elongation factor 1-alpha
Organism
hir
Heterobasidion irregulare
Pathway
hir03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HETIRDRAFT_413587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_413587
03016 Transfer RNA biogenesis [BR:
hir03016
]
HETIRDRAFT_413587
03012 Translation factors [BR:
hir03012
]
HETIRDRAFT_413587
04131 Membrane trafficking [BR:
hir04131
]
HETIRDRAFT_413587
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hir04147
]
HETIRDRAFT_413587
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
HETIRDRAFT_413587
Transfer RNA biogenesis [BR:
hir03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
HETIRDRAFT_413587
Translation factors [BR:
hir03012
]
Eukaryotic type
Elongation factors
HETIRDRAFT_413587
Membrane trafficking [BR:
hir04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
HETIRDRAFT_413587
Exosome [BR:
hir04147
]
Exosomal proteins
Proteins found in most exosomes
HETIRDRAFT_413587
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
DUF34_NIF3
Motif
Other DBs
NCBI-GeneID:
20673117
NCBI-ProteinID:
XP_009541702
JGI:
Hetan2_413587
UniProt:
W4KR25
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MGKDKTHVNVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVL
DKLKAERERGITIDIALWKFETPKYMVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGT
GEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDTTKWSEDRFNEIVKETSTFIKKVG
YNPKTVAFVPISGWHGDNMLEESPNMPWYKGWTKENKAGVVKGKTLLDAIDAIDPPSRPS
DKPLRLPLQDVYKIGGIGTVPVGRVETGIIKAGMIVNFAPSNVTTEVKSVEMHHEQLEQG
GPGDNVGFNVKNVSVKDIRRGNVASDSKNDPAKEAASFNAQVIVLNHPGQIGAGYAPVLD
CHTAHIACKFAELIEKIDRRSGKVMEASPKFVKSGDACIVKLIPSKPMCVESYNEYPPLG
RFAVRDMRQTVAVGVIKSVDKTEKAGGKVTKSAEKATKKK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggataagactcacgttaacgttgtcgtcatcgggcacgtcgattccggcaag
tccaccaccactgggcacttgatctacaagtgcggtggtatcgacaagcgtaccatcgag
aagttcgagaaggaggccgctgagctcggcaaaggctccttcaagtatgcttgggtgctc
gacaagctgaaggctgagcgtgagcgtggtatcacgattgatatcgctctctggaaattc
gagacccctaagtacatggtcactgtcatcgatgctcctggacatcgtgatttcatcaaa
aacatgatcacgggtacctctcaggctgactgtgccattctcattatcgccggtggtact
ggtgagtttgaggctggtatctccaaggacggccagacccgcgagcatgcgctgcttgct
ttcacgctcggtgtgcgtcagctcatcgttgccgtcaataaaatggacaccaccaagtgg
agcgaggatcgtttcaatgagatcgtcaaggagacgtccaccttcatcaagaaggttggc
tacaaccccaagactgttgcgttcgtccccatctctggctggcacggtgacaacatgttg
gaggaatcccccaacatgccttggtacaagggctggaccaaggagaacaaggctggtgtt
gtcaagggcaagaccctccttgatgccatcgacgccatcgaccccccctctcgcccatct
gacaagcccctccgtctccctctccaggacgtctacaagatcggtggtattggcacggtg
cccgtcggtcgtgtcgagactggtatcatcaaggctggaatgatcgtcaactttgctccc
agcaacgtcaccactgaagtcaagtctgtcgagatgcatcacgagcagctcgagcagggt
ggccctggtgacaacgttggcttcaacgtcaagaacgtatcggtcaaggacattcgtcgt
ggcaacgtcgcctccgactccaagaacgaccccgccaaggaggctgcgtccttcaacgct
caggtcatcgttctgaaccaccctggtcagattggtgctggctatgcaccagtgctcgat
tgccacactgcccacatcgcctgcaagttcgccgagcttatcgagaaaatcgatcgtcgt
tccggcaaggtcatggaggcgtcgcccaagtttgtcaagtctggcgacgcatgcattgtc
aagctcatcccgagcaagccaatgtgcgttgagtcctacaacgagtacccacctctgggc
cgcttcgccgtccgtgatatgcgtcagaccgtcgctgtcggtgtcatcaagtccgtcgac
aagaccgagaaggctggtggcaaggttaccaagtccgccgagaaggccaccaagaagaaa
taa
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integrated database retrieval system