KEGG   Heterobasidion irregulare: HETIRDRAFT_415544
Entry
HETIRDRAFT_415544 CDS       T03455                                 
Name
(RefSeq) hypothetical protein
  KO
K13176  THO complex subunit 7
Organism
hir  Heterobasidion irregulare
Pathway
hir03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:hir00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    HETIRDRAFT_415544
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hir03019]
    HETIRDRAFT_415544
   03041 Spliceosome [BR:hir03041]
    HETIRDRAFT_415544
Messenger RNA biogenesis [BR:hir03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     HETIRDRAFT_415544
Spliceosome [BR:hir03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    HETIRDRAFT_415544
SSDB
Motif
Pfam: THOC7 COG6_N
Other DBs
NCBI-GeneID: 20673256
NCBI-ProteinID: XP_009543546
JGI: Hetan2_415544
UniProt: W4KES5
LinkDB
Position
Unknown
AA seq 345 aa
MSSKPSAPSTPQPSAITPLTVEEEDAIIHSRITNDERALRRVIKKFHGYTSVAHEPIVPI
PSSSISIEDARDAFLVELASFSLQLKKAVMVCEAEARQVEEYHRERQRIEDERVALRGQI
EQLKTSLEHAQLERRRKIEYDLVAEKINTLPSRQELQRTIDSLESDMTAIRVDHDAQNRL
IHAQKSALVSIISELGSLRLMGKDTETPRDTTPALDTVGSDGEVPLSIVTAADADTEKEE
GEEDRQSSDDVPLSATLNPGPRAFYASRDSVATGSRSLRSRTGLSSAPQSAAVSRAASKS
IEDDDIEMGELTEEPKDSRTKVKVRELEEGEASDESSELSDPPDD
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgtcgagtaaaccgtccgcgccgagcacgcctcagccatccgcaattactccgctaact
gtggaggaagaagatgctatcatccactctcgaattacgaatgacgaacgtgcactacgt
cgggtcatcaaaaaatttcatggctacacctcagtcgcccatgagcccattgtccccatt
ccatcgagctccatcagtatcgaggatgcgcgagacgcgtttttagtggagcttgcctcc
ttcagtctacagctgaagaaagcagttatggtctgtgaggcagaggcgcggcaggtcgaa
gagtaccatagggaaagacagagaattgaggatgagagagttgcactcagagggcagatc
gaacaactgaagacgtccttggagcatgcgcagctggagcgccggcggaagatcgaatat
gaccttgttgccgagaagatcaacactcttccaagtcgacaggaactccagcgaacaata
gactctcttgagagtgacatgaccgctattcgcgtggatcatgatgctcaaaatcgcctt
attcacgctcaaaaatctgctttggtctcgataatctccgaacttggttctttgcgcctt
atgggcaaggatacagagaccccgcgcgataccacaccagcgcttgacaccgttgggagc
gatggcgaagtaccgctctccattgtcacagctgccgacgcggacactgagaaggaagaa
ggcgaagaggataggcagtcgtctgacgatgtgcctctttcggctacgctcaatcctggc
ccgagagccttctacgcctcacgagattccgtcgctacaggatcacggagtttgcgctca
cgcactggtctgtcgtctgctccgcagtctgctgccgtctcgcgtgcagcatcaaaatcg
atcgaggatgatgatattgagatgggcgagctgacggaggaacccaaggattcgaggacg
aaggtaaaagttcgggagttggaagagggtgaggctagtgacgagagtagtgaattgtca
gaccctccagacgattga

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