Heterobasidion irregulare: HETIRDRAFT_415544
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Entry
HETIRDRAFT_415544 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K13176
THO complex subunit 7
Organism
hir
Heterobasidion irregulare
Pathway
hir03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HETIRDRAFT_415544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_415544
03041 Spliceosome [BR:
hir03041
]
HETIRDRAFT_415544
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
HETIRDRAFT_415544
Spliceosome [BR:
hir03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
HETIRDRAFT_415544
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC7
COG6_N
Motif
Other DBs
NCBI-GeneID:
20673256
NCBI-ProteinID:
XP_009543546
JGI:
Hetan2_415544
UniProt:
W4KES5
LinkDB
All DBs
Position
Unknown
AA seq
345 aa
AA seq
DB search
MSSKPSAPSTPQPSAITPLTVEEEDAIIHSRITNDERALRRVIKKFHGYTSVAHEPIVPI
PSSSISIEDARDAFLVELASFSLQLKKAVMVCEAEARQVEEYHRERQRIEDERVALRGQI
EQLKTSLEHAQLERRRKIEYDLVAEKINTLPSRQELQRTIDSLESDMTAIRVDHDAQNRL
IHAQKSALVSIISELGSLRLMGKDTETPRDTTPALDTVGSDGEVPLSIVTAADADTEKEE
GEEDRQSSDDVPLSATLNPGPRAFYASRDSVATGSRSLRSRTGLSSAPQSAAVSRAASKS
IEDDDIEMGELTEEPKDSRTKVKVRELEEGEASDESSELSDPPDD
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtaaaccgtccgcgccgagcacgcctcagccatccgcaattactccgctaact
gtggaggaagaagatgctatcatccactctcgaattacgaatgacgaacgtgcactacgt
cgggtcatcaaaaaatttcatggctacacctcagtcgcccatgagcccattgtccccatt
ccatcgagctccatcagtatcgaggatgcgcgagacgcgtttttagtggagcttgcctcc
ttcagtctacagctgaagaaagcagttatggtctgtgaggcagaggcgcggcaggtcgaa
gagtaccatagggaaagacagagaattgaggatgagagagttgcactcagagggcagatc
gaacaactgaagacgtccttggagcatgcgcagctggagcgccggcggaagatcgaatat
gaccttgttgccgagaagatcaacactcttccaagtcgacaggaactccagcgaacaata
gactctcttgagagtgacatgaccgctattcgcgtggatcatgatgctcaaaatcgcctt
attcacgctcaaaaatctgctttggtctcgataatctccgaacttggttctttgcgcctt
atgggcaaggatacagagaccccgcgcgataccacaccagcgcttgacaccgttgggagc
gatggcgaagtaccgctctccattgtcacagctgccgacgcggacactgagaaggaagaa
ggcgaagaggataggcagtcgtctgacgatgtgcctctttcggctacgctcaatcctggc
ccgagagccttctacgcctcacgagattccgtcgctacaggatcacggagtttgcgctca
cgcactggtctgtcgtctgctccgcagtctgctgccgtctcgcgtgcagcatcaaaatcg
atcgaggatgatgatattgagatgggcgagctgacggaggaacccaaggattcgaggacg
aaggtaaaagttcgggagttggaagagggtgaggctagtgacgagagtagtgaattgtca
gaccctccagacgattga
DBGET
integrated database retrieval system