Heterobasidion irregulare: HETIRDRAFT_420426
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Entry
HETIRDRAFT_420426 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K14855
ribosome assembly protein 4
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hir03009
]
HETIRDRAFT_420426
Ribosome biogenesis [BR:
hir03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
HETIRDRAFT_420426
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
DSE1_N
Beta-prop_WDR36-Utp21_1st
ASA1
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_SCAP
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
CFAP251_N
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
NLE
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_NOL10_N
Beta-prop_DCAF4
Beta-prop_WDR75_2nd
PAC11
Beta-prop_NWD2_C
WDR54
TRM82_WD
Beta-prop_NUP159_NUP214
Tricorn_N
DUF8077
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
20673656
NCBI-ProteinID:
XP_009549516
JGI:
Hetan2_420426
UniProt:
W4K0K4
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MAALLPPPKRQKVYHGIPEPVPELPAPSPNIVVQFVSEDDGTSLAPAINLPANVSREDLQ
VLINRLTSKDDDPVPFQFHITLPADATSGGEPTRVVITKSIESDVLSHPSQSFTPEDVFV
VHCSPQSVFRVRPATRCSSTLSGHTSPILCASFSPTGNLLATGSGDANARLWNLSTETPS
HTLSGHRGWVLCVEWEAMERKLATGGHDNQVRIWDPKTGKPIGDALKGHTKWVTSLSWEP
IHINPAAPRLASSSKDGTVRVWSLLTRRVEYTLGGHTASVNIVRWGGGGLNGKGVLYTAS
SDRTVRIWDANGGRLLHILKDHAHWVTTLALNTDFVLRTGPFDHTGKRPISDEEAQTRAL
ERYNALVSTTSELMISGSDDHTLFLWSLFPSRAADTSSSEQAAANGGKLKPLARLTGHQR
QVSQVAFSPDGRWAASAAWDNSVRIWEGRTGKFVATLRGHIGAVYRLTWSADSRLLVSAS
KDTTLKIWDLKTYKLKTDLPGHTDEVYCVDFVADKIVSGGRDRTVKIWKN
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggctgcactgttgccccctccaaagcgccaaaaagtctatcatggcatcccagaacca
gtgccagagctaccggcgccgtctccaaatatcgtcgtccaattcgtctctgaagacgat
ggcacatctttagcaccggccatcaatttacctgcgaacgtctccagagaggacctgcaa
gtcctgatcaacagactcacctccaaagacgacgaccccgtccctttccaattccacata
acgttgccggcagacgctacaagtgggggagagccgacgagagttgttataacaaaatcg
attgagtcggatgtcctgtcgcacccctcgcagtctttcacaccagaggacgtctttgtg
gtccattgctcaccgcagtctgtgtttcgagtgcggccggcgacgcgatgttcatcaact
ttgtctggacacacctctcctatattgtgcgcgtcattttcccccaccggaaatctcctc
gcgactggttctggggacgccaacgcgcgtctatggaatctgtccacagaaacaccatca
catacactgtcggggcacagaggttgggtgctatgcgtagagtgggaggctatggagaga
aaactagccacaggcggtcacgataatcaggtgcgtatatgggaccctaaaaccgggaag
ccgatcggagacgctctcaaaggacacacaaaatgggtcacatccttgtcatgggagcca
atacacataaatcccgccgcgcctcgccttgcatcatcttcaaaagacggcaccgtccgt
gtctggtccctccttacccgccgagtcgagtataccctcggcgggcataccgcgagtgta
aacattgtacgatggggcggtggggggctgaacggcaagggggtgctttacactgcgtcc
tccgatcggacagtgcgtatctgggacgcaaacgggggaaggttattgcatatattaaaa
gatcatgctcactgggttacgacgctggcgctgaacacggacttcgtccttcgaacaggc
ccttttgaccacaccggaaagcgaccaatatcggatgaagaagcgcaaactcgtgcatta
gaacggtacaacgctctggtctcgacaacgtcagagctcatgatctctggctctgatgat
cacactcttttcctctggtctctattcccctctcgcgcggcagacacctccagctccgag
caggcggcggcaaacggcggcaaactgaagcctcttgctcgtctcacgggccatcagcgg
caggtgtcccaagtcgcgttcagcccggatggcagatgggctgccagcgccgcgtgggat
aacagtgtcaggatttgggaaggtcgcacgggaaagtttgttgcgacgctgcgaggacac
atcggtgccgtctaccgcctcacctggtctgcagattcgaggttactggttagcgcgagt
aaagatactacgctcaagatctgggacttgaaaacatacaagcttaaaaccgacctgccg
ggtcatactgacgaagtgtactgtgtcgacttcgttgccgataagatcgtcagtggcggg
cgtgacagaacggtcaaaatatggaaaaattaa
DBGET
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