Heterobasidion irregulare: HETIRDRAFT_420747
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Entry
HETIRDRAFT_420747 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
hir
Heterobasidion irregulare
Pathway
hir03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HETIRDRAFT_420747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_420747
03036 Chromosome and associated proteins [BR:
hir03036
]
HETIRDRAFT_420747
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
HETIRDRAFT_420747
Chromosome and associated proteins [BR:
hir03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HETIRDRAFT_420747
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Glyco_hydro_8
Motif
Other DBs
NCBI-GeneID:
20673672
NCBI-ProteinID:
XP_009549953
JGI:
Hetan2_420747
UniProt:
W4JWV6
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MARFTALASDTSDDETYQQPARPVPNSTPIPRANDAPYQDEDADISDSDSSRMDEDELTS
KPLPHPQRKRRDKNALVEGEDGEFYHAHELDEDEGENDASSSSSSESSPRHTRRPGPTSV
PWAQQVGVDPNRMHVMQASLFRVPEEEQALKHALPEKHGQLHLMMSNTLNRKHSRDSEGD
GLRVVAQERASFAYDIETVPYRPSRKYARVESSASVVSGNDSSMVDAGLAFGRSFRVGWG
PGATLVYSGQLCAPSSTSTATANSSMLTKARAQFSTYENDSSSMYSKLLSHHLTNTLITP
DADGVPFANPASDLNFASFTSLFSSTDRSFEALLFRLGHTLFDDIDLHLRDNVTVDIREY
THAIRRKSALSSWLEEAVASSVDQELKNNSSDTPVGAAFSLLTGHQVEKACEAAMGSSNL
KLATLISQAGGDAEFQEDLRAQLQIWREERIDVHIDDSVRKVYALLAGIVDVLEGSNGAG
IEHCSDLSLTEGLDWKRVFGLHLWYAQPMHVPIAEVFRSYEQHWRHTPDRVAPPKPWYAE
NPSQGDTLWQLPEDANPPDALYSLLRLYADPACSLSKICSPFSFGPSPVDYSLPWHLYIL
FSRCMRIRDFADRDDPGFRRDETEESQNEDERVEGHSPSADLLASSYALQLEQAGLIQEA
VFVLLHIEGSAGREKAIKDLLGRSAPNLDDWMTRGIVGSLKIPLSWVNEAKAMHALDNGE
VYDAYRLYLQAGLYDTAHELAVLELAPEAVIRDDLTLLKTLFERIVGHAVDSWHVRGQAF
LDYVDVRTRVPILQAEISDPELAPDASQVAELDELTRKIPKLINILSDAFHDRSNPQHNV
ALSVMIKGLMHELDSVQPLAISQVRSMPVNEATKLHHIHSAAYAGFLKTIQVA
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggctcggttcactgccctagcaagcgacaccagtgacgacgaaacctaccaacagccg
gccaggcccgtgccaaactccacccccatacccagagccaatgatgcaccctatcaagac
gaggatgcagatatatcagactcggactcatcgcgtatggacgaggatgagctgacatca
aagcctcttccacatccccagcggaaacggcgagacaagaacgcgttggtggagggcgag
gacggcgagttttatcacgctcatgagttggacgaggatgagggagagaatgacgcttcc
tcaagttcgtcatctgagtcttcccctcgtcacacgagaaggcctggaccaacatctgtt
ccatgggcgcagcaggttggagtcgacccaaatagaatgcatgtgatgcaggcttcgctc
ttcagggtaccagaggaagaacaagcattaaagcatgcattaccagaaaaacatgggcag
cttcatcttatgatgtcgaatacgctcaaccgtaagcatagcagagattcagaaggggat
ggtcttcgggtcgtggcacaagagcgtgcctcgtttgcctatgatatcgaaacagtaccg
tatagaccatcccgaaaatatgcgcgtgtagagagctcagcctctgttgtaagtggaaat
gacagctctatggttgatgcgggacttgccttcgggaggtcattccgggtgggctggggc
ccaggtgcaacgctagtgtactcggggcaactgtgtgctccgtcgagtacttctacagcg
acggccaactcttccatgctcacaaaagcccgtgcgcaattctcgacctatgaaaacgac
tcgtctagcatgtattcgaagcttctctcgcatcatctcaccaacactctcatcaccccc
gacgcagatggcgtgccatttgccaaccctgcctccgatctcaactttgcttcgttcaca
tcgttgttctcatcgacagatcgctctttcgaagcactgctcttccgtctaggccataca
cttttcgacgacatcgacttacatctacgagataatgtcacagttgacatcagggagtat
actcacgccattcgccgcaaatctgccctttcatcatggctcgaagaagcagtcgcttca
tctgtcgaccaggaattaaagaacaactcatcagacactccagtcggggctgcatttagt
ttactcacaggacatcaagtggagaaagcttgcgaggctgccatgggtagcagcaatctc
aagctagcgactctcatctcgcaggccggaggtgacgcggaatttcaagaggatttgcgt
gcgcagctgcaaatttggcgcgaagagcggatagacgtccatattgacgacagcgtgcgt
aaagtatacgccttgcttgcaggcatcgtagatgtgcttgagggttccaacggcgctgga
attgagcattgttccgatctgtctctcacagagggattggactggaagcgcgtgtttggc
cttcatttatggtatgcgcagcccatgcatgtacccattgcagaagtgtttcgctcctac
gaacagcattggagacatacgccagatcgggtcgccccccctaaaccatggtacgccgag
aacccctcgcaaggcgacacactctggcaactaccagaagatgcgaatccccccgacgcg
ctttactccctccttcggctatatgccgatcccgcatgctccctgtcaaagatttgctct
cccttttcttttgggccctcgcctgttgattattccctcccatggcatctctacattctc
ttctcacgatgcatgcggatacgtgactttgccgatcgggacgacccaggtttccgtcga
gatgaaactgaagaaagccagaatgaggacgagagagtagaaggacacagcccaagcgcg
gatctactagccagtagttatgctctacagttggaacaagcgggtttgatccaagaagct
gtattcgtcctgctacacatcgaagggtctgccgggagagaaaaggccatcaaagatcta
ctcgggcggtctgcacccaatctggatgattggatgactcggggcattgttggtagcctg
aaaatcccattgtcgtgggtcaacgaagccaaggccatgcatgctcttgacaacggagaa
gtttacgacgcataccggctttatcttcaggcagggctgtatgatactgcacacgagctt
gcagttctcgagttggcgcccgaagccgtcatacgagatgatttgactctgctgaaaaca
ttgtttgagagaattgtgggtcatgccgtcgacagctggcatgtacggggacaggctttc
ctcgactatgttgacgtcaggacacgcgtgccgatcctgcaggctgaaatctctgacccc
gagttggctcctgacgcttcgcaagtagccgaactggatgaactgaccaggaagataccg
aaactcatcaacatcctatctgacgcattccacgatcgatccaatccgcaacataatgtc
gcgctgtcagtgatgatcaaaggtcttatgcacgagcttgatagtgtgcagcccctcgcc
atttcccaggtccggtcaatgccagtcaacgaggcgaccaaactgcaccacatacactcc
gcggcatatgctggatttttgaagacgatccaagtggcttaa
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