Heterobasidion irregulare: HETIRDRAFT_424556
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Entry
HETIRDRAFT_424556 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K20408
SEA/GATOR complex protein SEA2/WDR24
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hir04131
]
HETIRDRAFT_424556
Membrane trafficking [BR:
hir04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
HETIRDRAFT_424556
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
20673981
NCBI-ProteinID:
XP_009542008
JGI:
Hetan2_424556
UniProt:
W4KHD0
LinkDB
All DBs
Position
Unknown
AA seq
1039 aa
AA seq
DB search
MRSCWERILSDSSSTLPPEHKASVGHGGHRIDAGKNLWKGHTVKIDNATTDVVWGRANFD
QKILTSARSGALIMWDIGKSGASKFDGDLRVWDLRDMAKSITRIHHPTSVRAVSFSPDSH
NPVQAVVGLDNGSIYRFLGYSWDLKMAQRGQLDRIPVAHSGPILSLDWCAGSNIPSQGAI
SSTFSGMTSVFAESTATGTTGNSGSSRGWVVSGGLDRMVKAWDMTTPGNLSHISYVPAYT
LSVSFPVRRVLWRPGYECEVAVVSNWESGIGSNQDLSASGSENGAVAEGENDVVAPVPTR
VGGDTGDAVEIWDVRRGYIAKWAVGGSAVEGGVTDIAFADSHALWAQHSSGTFSQLDLRH
STRPLDLIPRVAVTWDATGTLAFVSDKRLRWEVPYDDIDPAKIPVLTERSERPKALGDGS
YKSTSQNFGTYGYDHSPEDLDAFEKLARGRVQAAQTWMLLQSLLIPPTPTPSPSRPPSPA
LSPLPMISPALPHSASAPAAVPSEQSRTFAASCNPATAPIFVGLTFTSLCGAYTCISING
YLKPAYCFFSIPSFLHLHPSVVWCKLHPTQVTCSVIPTSVNFVSIADASQRECWVTWSVG
DGALDDSDSSNSSKGGGSGSDDGHHIAETADRPPGLILSPTAISFHRLSTGTPNPSPLSR
VAGQHVLTEDEREDEKDDEGDSPSPASTDTGSNSSNEEGSARLISSRKSYSVQRSKSRSQ
TRSRKGSMIRAKARSRSTTLAVPIPVSTQPRGHHALVKQGSASSMRTVTAEDTSFRENEH
EHRGAIEEVRERMSFRGGAFVEGSSGARGHRGASIAAGSLLSTSSIRGRQNANNNTKRTK
QTEEIREQERRLTQAAWAAVRALLEWYAEEGDMQMCALMALVAQEELAVSKQRLVMFVEG
YIASDDSFLDLLPFGKYSKQHASPSHLPVRAMLFQCPVCSHGGHQECYRRYHAEQPMLEV
HMPPSPSLSEIGLRGRSLSRSGTEMAEDEGSNSTDGKFEASGLPTPATLAQTRRLMGHPC
AAGCGHYCWMANERVEEVL
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagttgctgggagagaatattgtcagattcttcgtccactcttccaccagagcac
aaagcctcagttggccatggcggtcacagaatcgacgctgggaagaacttatggaagggt
catactgtcaagatcgataacgcgactacggacgtagtatggggccgtgccaattttgac
cagaagattttgacgagtgcacgcagcggtgcactcatcatgtgggatataggcaagagt
ggtgcatctaaatttgatggagaccttcgcgtctgggatttacgagacatggccaaatct
atcacccgtatccaccacccgacttctgtccgcgccgtcagcttctctccggactcgcac
aaccctgtgcaagccgtcgttggtctggacaatggcagtatctatcgtttcttgggctat
agttgggatctgaaaatggcgcagcgaggccaactcgaccgtatacctgttgcccattct
ggccccattctctcattggattggtgtgcaggttcaaacataccgtcccagggtgctatc
tccagcacctttagtggcatgaccagtgttttcgctgaatcgacggcaacggggaccaca
ggcaactctggttcgagtcgcggatgggttgtcagtggtggcctcgatcgtatggtcaaa
gcatgggacatgacgacgcctggaaatctgtctcacatatcctacgtccctgcgtatacg
ctctccgtttcgtttcccgtgcgcagggtgctttggcgcccgggatatgaatgcgaagtt
gctgtcgtctcgaattgggaatctgggattggttcgaatcaggatctgagtgcgtctggg
agcgagaatggtgccgtagctgaaggggagaatgatgtggtagcgccagttcctacccga
gtgggcggtgatacaggtgacgcggtagagatttgggatgtcaggcgtggatacatagct
aaatgggcagtggggggctcagccgttgaaggcggcgtcactgatatcgcgtttgcggat
tcacatgctctctgggctcagcattcctctggtacattttcgcaacttgaccttcgacac
tcaacgcgtccgttggatttgattcctcgtgtcgctgtaacatgggatgctactggcact
ctcgctttcgtgtcagataagaggctgcgatgggaggttccctatgatgacattgatcct
gccaaaattccagtcctgactgagcgaagtgaacgtccaaaggcactcggagatggatca
tacaagtcaacgtctcaaaacttcgggacttatggatatgatcattctcctgaggatctt
gatgcctttgagaagctagctagaggtcgtgtccaagctgcccaaacttggatgctgctc
caatctttattgatacctcccacccccactccgtctccatcacgcccaccgtcaccagct
ctgtcccctctaccgatgatatctccggctcttccacattctgcctctgctcctgccgca
gtccccagtgaacagtccaggacattcgccgcgtcgtgcaaccccgccaccgcgcccatc
ttcgtcggactcaccttcacctcactctgtggcgcctatacctgcatctctatcaacggc
tatctcaagcccgcatactgtttcttctccatcccgtccttcctccatcttcacccgtcg
gtcgtctggtgcaagcttcaccccactcaggtcacgtgttccgtcattccgacgtccgtc
aatttcgtctccatcgccgacgcatctcagcgagagtgttgggtcacttggagcgtcggg
gatggcgcgttggacgattcagattcaagtaatagcagtaagggaggtggaagcgggagc
gatgacggccaccacattgcagaaaccgcggatcgaccgcctggtctcatattatcgcct
acagctatatcatttcaccggctctcgactggtacgccaaatccgagtccgctctcgcgg
gtagcaggacagcatgttctgacagaagatgagcgcgaggatgagaaggacgacgaggga
gactcgccgtcacctgcatcaaccgatacggggtcgaatagttcgaacgaagagggctct
gcgcgtttgatttcttctaggaagtcgtacagcgtgcaacgctccaagtcgagatcacaa
acacgatcaaggaaaggttccatgatccgcgcgaaggcgagaagcagaagtacgaccttg
gcagttccgatcccagtatcaactcagccacgggggcatcatgcattggtgaaacagggc
tctgcgagcagtatgcggactgtgacagcagaggacacatctttcagagagaacgagcat
gaacacagaggagcaattgaggaggtgagggagcgtatgagcttccgtggaggagctttt
gtggaaggatcgtctggcgctcgaggccacaggggggcgtctattgcagcgggcagcttg
ttgagcactagctcgatcagaggaaggcagaatgcgaataacaacactaaaagaaccaag
caaactgaagagatacgggagcaggaaaggcgattgactcaagcagcatgggcagcagtc
agagctttgctggagtggtatgcggaggaaggagacatgcagatgtgtgctctgatggca
cttgttgcgcaggaggaactagctgtgagcaaacaaaggctagtaatgtttgttgagggg
tacattgcttcagacgatagttttttggacctccttcctttcggtaaatattcaaagcag
cacgcatctcccagtcatctcccggtacgggccatgctgtttcagtgccctgtctgctcc
catggcggacaccaagagtgctaccgccggtaccatgcggagcaaccgatgcttgaagtc
catatgccaccctctccatcattgagtgaaatcggactgcgcggacgatcattatcgaga
agcggtactgaaatggcagaagacgaaggcagcaattctacggatggaaagtttgaggct
tcaggtctccctacccctgctacgcttgcacaaacgcggcgattaatggggcatccgtgt
gcggctggatgtggacattactgctggatggcaaacgagagagtggaagaggtgctgtga
DBGET
integrated database retrieval system
