Heterobasidion irregulare: HETIRDRAFT_426408
Help
Entry
HETIRDRAFT_426408 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K12817
pre-mRNA-splicing factor 18
Organism
hir
Heterobasidion irregulare
Pathway
hir03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HETIRDRAFT_426408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hir03041
]
HETIRDRAFT_426408
Spliceosome [BR:
hir03041
]
Complex C
Other components
Step II factors
HETIRDRAFT_426408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Prp18
PRP4
Motif
Other DBs
NCBI-GeneID:
20674116
NCBI-ProteinID:
XP_009545240
JGI:
Hetan2_426408
UniProt:
W4KAX3
LinkDB
All DBs
Position
Unknown
AA seq
355 aa
AA seq
DB search
MDALKAAIQTKRKALDEMPSKPSKYMRRGDIERLKEEEERKAREAERLAKEEAERNTPKA
KTPASRSQTSSPHPSASRLTASPPPDASTLEAITTTFNISNDETVRRLRAKGQPVRLFGE
SDKERRLRLRALELIEEKGHDRAGGQNDFRKALEDVESAERELKDRTSASDAGKGKKKGD
AEGEGGVLDLGLIKTDPDKLYPIIYFALKRTLKEWEESLAERPEHIKRSTQGKLAAATQV
QSAEYLKPLFKIIRSRSLPSDVLARIAEIVHHMQKRQYQRANDSYLRLSIGNAPWPIGVT
MVGIHERSAREKISSDQVAHVLNDEVSRKYIQSLKRLLTFSQTKYPPEDVSQLMG
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggacgctctcaaagctgctattcagaccaaacgcaaggcactcgacgagatgccgtca
aagcccagtaaatacatgcgcaggggcgatattgaacggttgaaagaggaagaggaacgc
aaagcgcgggaggcagaacgccttgcaaaagaggaggcagaacgcaatactcccaaagcc
aaaacccccgcctcccgctcccagacctcttctccgcatcccagtgcatcccgtttgacc
gcttcacctccacctgacgcttccacgttggaggccatcacgacgacatttaacatctcc
aacgacgagacagttcgtcgtctccgcgccaagggccagcctgtccgcttgttcggtgag
tcggacaaggagcgccgcctgcgactccgcgcccttgagctcatcgaggaaaagggacac
gaccgtgcgggtggacaaaacgactttcgcaaggcgcttgaggacgtcgagagcgcagag
cgagagctgaaagaccgaacctctgcctccgatgcaggaaaggggaagaagaagggcgac
gcagaaggtgagggaggtgtgttggatctgggacttatcaagaccgacccggacaagctg
tatcctataatctattttgctctcaaacgaacgttgaaggagtgggaggagagcttagct
gaacgaccagaacacatcaaacgctccacgcaggggaagttggcggcggcaacgcaggtc
caatcagcagagtatctcaaaccgttgttcaaaatcatccgttcacgatctctcccatca
gatgtcctcgcacgcatagcagagattgtgcaccacatgcagaagaggcagtatcaacgc
gcgaacgactcgtacctgcgcctttccatcggcaatgctccctggcctatcggtgtaacc
atggttggcatccatgagcggtcagctcgcgaaaaaatttcttcagaccaggtcgcacac
gtgttgaacgacgaagttagtcgaaagtacatacaaagccttaagcggctgctcacgttc
tcacagacaaagtatcctcccgaagacgtatcgcagctcatggggtag
DBGET
integrated database retrieval system
