Heterobasidion irregulare: HETIRDRAFT_426642
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Entry
HETIRDRAFT_426642 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K03504
DNA polymerase delta subunit 3
Organism
hir
Heterobasidion irregulare
Pathway
hir03030
DNA replication
hir03410
Base excision repair
hir03420
Nucleotide excision repair
hir03430
Mismatch repair
hir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HETIRDRAFT_426642
03410 Base excision repair
HETIRDRAFT_426642
03420 Nucleotide excision repair
HETIRDRAFT_426642
03430 Mismatch repair
HETIRDRAFT_426642
03440 Homologous recombination
HETIRDRAFT_426642
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hir01009
]
HETIRDRAFT_426642
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hir03032
]
HETIRDRAFT_426642
03400 DNA repair and recombination proteins [BR:
hir03400
]
HETIRDRAFT_426642
Protein phosphatases and associated proteins [BR:
hir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
HETIRDRAFT_426642
DNA replication proteins [BR:
hir03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
HETIRDRAFT_426642
DNA repair and recombination proteins [BR:
hir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
HETIRDRAFT_426642
MMR (mismatch excision repair)
DNA polymerase delta complex
HETIRDRAFT_426642
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
20674129
NCBI-ProteinID:
XP_009545613
JGI:
Hetan2_426642
UniProt:
W4KDG0
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MDVDEQDMDNGEDVVETTILLVAESDLDNAQGSFSQTYSVHIYSLSPSPVREANLICAPT
PNLRQVELKEGPGFASRVGRITGEHVEVKAKPPKGKAGLAVAASSSETKMASNIKAVTSA
QDPKVDKKEETKPPPKRESEDIQRKPQASGKLNWSKALPKAMKNDDHVAPDTKMKGQESH
PIKDKEKLPTKREKVELKRGIKRKSPARLLDSDDEKSSTSSVKLPKPAPTNEAPKAPIGA
RVKKRVVVSDDEEEAVEDPKPSRSKAAGKAKALSFDSDTDEALRAMMDVDDDQVIKASRP
SISSHDAAHDDDVEMHSEQQEDPEPAPKPKPRKKKEKKVVPVGRNGFKKRRVVKSRQTFD
EKGYMVTEDYSSYESIDDEEQEPEAPPKAKGNRKPPGIKLTDGVPSPNMASTKGQTKDSR
VSDGSHLNVKAGASRVGKQPSLMNFFGKK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggacgagcaggacatggataatggcgaggacgtagtcgagacgacaatccta
cttgttgcggagagcgaccttgataatgcccaagggagtttctcgcaaacatattcggtg
catatatacagcctttcaccctcgcctgtccgagaagcaaacctaatttgtgcgccaaca
cctaatctccgtcaagtagagctcaaggaagggccgggctttgcatcgcgggttggtaga
atcaccggcgaacatgttgaggtaaaagccaagccacccaaaggaaaggctggccttgcc
gttgctgcatcctcctcggaaaccaagatggctagtaacatcaaggccgtaacctcggcc
caggatcccaaggtagacaagaaggaagagaccaaaccgcccccaaaacgagaatctgaa
gatatccaaaggaagccgcaggcgtctggtaaactgaattggagtaaagcgctcccaaag
gcgatgaagaacgatgatcatgtggcgcctgacacgaagatgaaaggccaggaatctcat
cctatcaaggacaaagagaagctacctaccaagagagagaaagtcgagctcaagcgagga
atcaaacgaaagtctcccgcgcgattgttagattcagatgacgaaaaatcaagcacttcg
tctgtcaagttgccaaagccagcacccactaacgaggctccaaaagccccgattggtgcc
cgagtcaaaaagcgcgtcgtcgtttccgacgacgaagaggaagctgtagaagatccaaaa
ccgtctcgcagcaaggcggctggaaaagccaaggcactgagttttgattcagacacggac
gaggctttgagggccatgatggatgtagacgatgaccaggtcattaaagcgtccaggcca
agtatctcatcgcatgatgcagcgcacgatgacgacgtagagatgcactcagaacagcaa
gaggatcctgagccggcgccgaagccaaagcctaggaagaagaaagagaagaaggttgtg
ccagtcgggaggaacgggttcaaaaagagacgcgttgtcaaaagtcgacaaacattcgat
gagaagggttacatggtcactgaagactattcatcgtatgaatctattgatgatgaagaa
caggagcctgaagcacccccaaaagccaaaggcaaccgaaagccacctggaatcaagctc
actgacggtgtcccttcgcctaatatggcatcgacgaaaggtcagacaaaagactcgcgt
gtatcagatggatcgcatctcaacgtgaaagctggggcctccagagtgggaaagcagccg
agcctgatgaatttcttcggtaagaagtaa
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