Heterobasidion irregulare: HETIRDRAFT_43178
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Entry
HETIRDRAFT_43178 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K08486
syntaxin 1B/2/3
Organism
hir
Heterobasidion irregulare
Pathway
hir04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
HETIRDRAFT_43178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hir04131
]
HETIRDRAFT_43178
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hir04147
]
HETIRDRAFT_43178
Membrane trafficking [BR:
hir04131
]
SNARE
Syntaxin (Qa)
Stx-PM
HETIRDRAFT_43178
Exosome [BR:
hir04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
HETIRDRAFT_43178
Exosomal proteins of other body fluids (saliva and urine)
HETIRDRAFT_43178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
Tweety
Spectrin
MCPsignal
DUF2207_C
DUF7260
SF3a60_bindingd
VitD-bind_III
Phage_holin_3_6
DUF4743
AviRa
V-SNARE
Motif
Other DBs
NCBI-GeneID:
20674565
NCBI-ProteinID:
XP_009541772
JGI:
Hetan2_43178
UniProt:
W4KKA3
LinkDB
All DBs
Position
Unknown
AA seq
283 aa
AA seq
DB search
MSDVKDSTTNLTAGTGDAMSAFYDEIASIQDSIKALNDSVSRISDLHSRSLNNMDDNAAQ
RNAQQLDELVADTSSLSSMLKRRIKALERQGGSGRDAQIRKQQTGLVKSKFMEAIQSYQQ
VEQQFRQKHKQRMERQYKIVKPDATPEEVKAVIEDDQGGQIFSQALMNSRLGESRAAYRE
VQERHADIKRIEKTLAELAQLFNDMSILVEQQDETINVIEAQAATVEKDVEAGLGYTEKA
VDSARAARKKRWICFFIILIILIIIAIVVAVVVVQNINKNKNK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgtgaaggacagtacaacgaatttgactgcgggaaccggggatgctatgtct
gcattctatgacgagattgcttcgattcaagatagcatcaaggcgctcaatgacagtgtc
tcgcggatatcagacctgcattcgcgttcactcaacaatatggatgacaatgctgcgcaa
cggaacgcgcagcagcttgacgagctggtcgcggacacgagctcactgagcagcatgctc
aagaggagaatcaaagcactcgaacgccagggtgggtctgggcgtgatgcccaaatcagg
aagcaacagaccgggctagtcaagtcaaagtttatggaggcgatccagagctatcaacag
gtagagcaacaattccggcaaaaacacaagcagagaatggagcgccagtacaaaatagtg
aaaccggatgctacaccggaggaggtcaaggctgtcattgaggatgaccagggcggccaa
atattctctcaagcccttatgaactcgcgtttgggcgagtctcgtgcagcttatcgcgaa
gttcaagaacgacatgccgatatcaagcgtattgagaaaaccctcgcagagcttgcacag
ttgttcaacgacatgagcattctcgtggagcagcaggacgagacaatcaatgttatcgag
gcgcaggcagcaacggtcgaaaaggacgtcgaagctggtctcggctacacggagaaggcc
gtggattctgctcgtgcagcacgcaagaagcgatggatctgtttcttcatcatcctcatc
atcctcatcatcatcgctatcgtcgttgccgttgtggtcgtccagaacatcaacaagaat
aagaacaagtag
DBGET
integrated database retrieval system
