Heterobasidion irregulare: HETIRDRAFT_431920
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Entry
HETIRDRAFT_431920 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_431920
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
HETIRDRAFT_431920
Surveillance factors
Other surveillance factors
HETIRDRAFT_431920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
20674575
NCBI-ProteinID:
XP_009541510
JGI:
Hetan2_431920
UniProt:
W4KP60
LinkDB
All DBs
Position
Unknown
AA seq
1226 aa
AA seq
DB search
MTTTTMHFGPEWMRPKHARPQNPPSPPPVTSHASPGASSYSSLVTTTLNMPQEKSDTAHP
FRYSKDELLKIYKEGGGRGGLGLEVERWEGVVREVGSEPIAMKEWTDAERKLFVGSLNSE
VRRRQSTDYLSPLATPSGERTKLLHTPSGVASPIRERFGNLIARRKDSSGSEQPALGVPR
KLSLSSMQGGTNSPRDSSLSSPRTRIPTTPGFDGILNAPDSWTSRRRASEAGAKSATGNE
YINDKEIKEEEEPQGGGWGHAAQNGDLNVHNHQAADDRMHSATVDVPDGLPSEARVIDRD
IANHSLGDQGFAGQAPTTPSSSHTNPDTANAGPPPGIADVASVEWSYLDPQGQKWYDEGY
FAADLLMKRTNIDQDWTPVGELAHRANGAQVFLSHFSSNSAPPGLARQVDSSFDGFAQSQ
DASGLNPPYQPIPTRSLHPSALEPYLTSGSVASDSPSSSFGAGRFGNGSPDPAAFGGHAG
GHLYSTNDSPAGSRHSTFAVDPSSAYGVARRPMFNDGSQYDPSFANRSIGNVTPIRTSSI
DNFGHGAPSLPVQNAWPSTGSVHPGLNGTRAGSTDPFAQSLAQGVDPTYVSQPSMVRNFN
NVRGIQDNMSMGYTSAPAMNHRDLSRLGVRDPYASEEKLDLRGGIGLDGYANGVSSSPFG
SQTLAQPFNQSPALQYSIAPTQPLPSPVTTQPSPHVIAPNRIMTPHQPSQTQSPWNTLEE
SVPKQSAVNSSVFPTSANTVSTRVAPPPPSPWARASQVSQPVTVAIDQSPWINTSIGAYD
NRTPASGPSSLTVSNLGQHNQQQDQEASGGTHEAQLTVESPVELSEVVGTPSSHVPSPEL
SQQQQPRPHRKSSTQGATVAPTAKSSTKPPSPVLPTTGKPVWSTEDEKKKGLSTSLSLRE
IQEAEAKKQEVKKAAEREKERIARAAAAQAPSQPLDDAQTFTASWGLPTSQVGATRHTST
KEAAPSAAATPSAPGAPAPVWTNAVKPSTSKKTMKEIQEEEERRKKMAAKETAAAAAARR
AYAETTTKSATSTPAVGGAWTTVGSNGKLSALTIPAGVRPVNPTATSTAAVTTSSTRAPN
GTVSVSRSPAPAAVKVASASKVDDTPVVPSPAFMKWLNDSLKGLNNSVNCEEIMSMLLSF
PLDVDPSTMEIISELIYANSTTLDGRRFAQEFVSKRKTDAASRRGMTTPGKGPSIADVVK
AQPKPSQQSEWGGFKVVNKKKKSGRA
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacaactatgcactttggtcccgaatggatgcgtcccaaacatgcgcgcccc
cagaacccgccttctcctcctcctgttacctctcatgcgtctcccggggcatcttcttat
tcgtctcttgtgaccaccactctgaacatgccccaagaaaaatcagacaccgctcaccct
ttccgctattccaaagacgagctcctcaagatctataaggaaggaggtggcagaggcggc
cttggactggaggttgaacgatgggagggcgtcgtacgcgaagttgggagcgaaccgatc
gccatgaaagaatggactgacgcggagagaaagctttttgtaggctctctcaactcggag
gtgcgcaggcgtcagtcgactgactacctctcacctctcgccactccgtcaggagaaagg
actaaactacttcacactccttctggtgttgcaagccccatacgggagcggtttggaaac
ctcattgccaggaggaaagacagttcgggttcggagcaacccgcgttgggcgtaccaagg
aaattgtcactgtcttcaatgcagggcgggacgaactctccgcgggacagtagtctctct
tctcctcgcactcgcatacccacaactcctgggtttgatggaatcttaaacgcaccagat
tcttggacttcgaggaggcgcgcttctgaagcgggcgcaaaatccgcgaccggcaatgaa
tacataaatgacaaggagataaaggaggaggaagaaccccagggcggcggatggggtcat
gcagctcagaacggcgatctcaacgttcacaatcaccaggctgcagatgatcgcatgcac
tctgctaccgttgacgttccggacggtctaccgtcagaagctcgtgtcattgaccgggat
attgcgaaccattcgttaggcgatcagggatttgcagggcaggcgcctacaacgccttcg
agctctcacacaaatcccgatacagcgaatgctgggccacccccaggtatcgccgacgtt
gcaagcgtcgaatggtcctaccttgaccctcaaggacagaagtggtatgacgagggctac
ttcgcggctgatcttcttatgaagcgcacgaatattgaccaagattggacacctgttggc
gagctggctcatcgtgcgaatggtgcacaggtattcctcagccacttttctagtaactca
gcacctcctggtttagctcgccaggtcgactcttcatttgatggttttgcgcagtctcaa
gatgccagcggattgaatccgccttaccaacctattcccacacgttctttacatccttct
gccttagaaccatatcttacttcaggatctgttgcatccgactccccctcctcctcattt
ggtgctggtcgatttgggaacggctctcccgacccagctgcatttggtggccatgcaggc
ggccatctttactccacgaatgattcgccagcaggctctcgacacagcactttcgccgtt
gacccttcatctgcgtacggggtcgcgaggaggcccatgttcaatgatggatctcagtac
gatccaagttttgccaatcgttctatcggaaacgtcacccctattcgaacatcgtctatc
gataatttcggccatggtgcaccttcactacctgtgcagaatgcctggccatcaactggg
agcgttcatccgggtttgaatggcacaagagcaggatccacagatcccttcgcacaaagt
cttgctcaaggcgtggaccctacatatgtttcacagccgtcgatggttcggaacttcaat
aatgtccgcggtatccaggacaatatgtctatgggttacacgagtgcccctgcgatgaac
caccgggatctttcacgcctcggggtacgagatccgtatgcatcggaagaaaagctcgac
cttcgtggtggaattggccttgatggttacgccaatggcgtttccagctcaccgttcgga
tctcaaacactggctcagcctttcaaccagtctccagcattgcagtattctattgctccg
actcagccactcccttctcctgtcacaacacaaccatcaccacatgttattgctccgaac
cgaatcatgacccctcatcagccttcacaaacacagtctccatggaacactctcgaggaa
tccgtacccaagcaatctgcagtgaactccagtgtattccctacctccgccaacactgta
tctactagggttgctcctccgccaccatcaccctgggctcgtgccagccaggtttcacag
cccgtaactgttgctattgatcaatcaccatggatcaacacctctattggcgcctacgac
aatcggacaccggcttctggccccagcagcttgacagtcagtaaccttggtcagcacaat
cagcagcaagaccaagaagcctctgggggcacccacgaagcgcaattgactgtggaaagt
ccagtggaactctctgaagtagtcgggacgccgtcttcacacgtacctagcccagagctt
tcgcaacagcaacaaccgaggccccatcgcaagtcctcgacgcagggtgcaaccgttgct
ccaactgcgaagtcttctacaaagcctccttctccagttcttcctaccacgggtaaaccc
gtctggtctaccgaggatgaaaagaagaagggcttgtctacgagtctcagcttgagggaa
atccaggaggccgaggcgaagaagcaggaggtgaagaaagctgctgagagggagaaggag
cggattgcgcgggcggcagccgctcaggccccgtctcaaccactcgacgacgcgcagaca
ttcacagcctcttggggccttcctacctctcaggttggtgccacccgccatacctcgacc
aaagaggcagcgccctctgcggccgccacgccatctgcgccgggtgcgcctgcacctgta
tggaccaacgcggtcaaaccctctacctctaagaagaccatgaaggaaattcaggaagag
gaggaaagacggaagaagatggctgcaaaggagacggctgcggccgcggccgctcgccgt
gcgtatgcggagacgacgacaaagagtgccacttctacacctgctgttggtggtgcctgg
actactgtcggttcgaatggtaaattgtccgccctgacaattcctgctggtgtgcgccct
gtcaatccgacagctacgtctactgccgcagtgactacttcttcaacgcgcgcgccaaat
ggcactgtttctgtctctcgatcaccagctcctgctgcggtcaaagtcgcatctgcatcc
aaggtcgacgatacgcctgtggttccttcgcctgctttcatgaagtggttgaatgactca
ttgaagggacttaacaactctgttaactgcgaagagatcatgtcaatgctgctctcgttc
cccctggacgtcgacccttcaaccatggagatcatttccgaactcatctatgcgaacagc
acgacgctcgatgggcggcgttttgctcaggagttcgtgagcaaacgtaagacggacgcg
gcgtcgagaagaggcatgaccactccaggtaagggtccttccatcgcggatgtggtgaag
gcgcagccgaaaccatctcaacaatcggagtggggaggcttcaaagtcgtcaacaagaag
aagaaaagcggtcgggcgtag
DBGET
integrated database retrieval system